Evidence map›Paper›PMID 38842661›Full record

ArticleMetabolic brain disease2024

Transcriptomics and metabolomics reveal hypothalamic metabolic characteristics and key genes after subarachnoid hemorrhage in rats.

Zongchi Liu, Zhaohui Chai, Fan Wu, Luyuan Zhang, Xiaoyi Wang, Zihan Xu, Yuxiang Weng, Jiangbiao Gong, Jian Shen, Renya Zhan and 1 more

Abstract read
In one paragraph

Article in Metabolic brain disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Observational
4 · The record

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5 · Who and what money

Authors and funding

11 authors.

Zongchi Liu *Department of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0000-0002-2384-2919
Zhaohui Chai *Department of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0000-0001-8286-4002
Fan Wu *Department of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0000-0002-6671-5282
Luyuan ZhangDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0000-0003-3275-3990
Xiaoyi WangDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0009-0002-1589-0280
Zihan XuDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0009-0005-6408-851X
Yuxiang WengDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0009-0003-1369-5278
Jiangbiao GongDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0009-0004-5201-5826
Jian ShenDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China.ORCID 0000-0001-5675-1565
Renya ZhanDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China. 1196057@zju.edu.cn.ORCID 0000-0002-0619-6257
Yu ZhuDepartment of Neurosurgery, First Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, 310000, China. 1316019@zju.edu.cn.ORCID 0000-0001-8360-4368

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subarachnoid hemorrhage (SAH) is a serious hemorrhagic event with high mortality and morbidity. Multiple injurious events produced by SAH can lead to a series of pathophysiologic processes in the hypothalamus that can severely impact patients' life. These pathophysiologic processes usually result in physiologic derangements and dysfunction of the brain and multiple organs. This dysfunction involved multiple dimensions of the genome and metabolome. In our study, we induced the SAH model in rats to obtain hypothalamic tissue and serum. The samples were subsequently analyzed by transcriptomics and metabolomics. Next, the functional enrichment analysis of the differentially expressed genes and metabolites were performed by GO and KEGG pathway analysis. Through transcriptomic analysis of hypothalamus samples, 263 up-regulated differential genes, and 207 down-regulated differential genes were identified in SAH groups compared to Sham groups. In the KEGG pathway analysis, a large number of differential genes were found to be enriched in IL-17 signaling pathway, PI3K-Akt signaling pathway, and bile secretion. Liquid chromatography-mass spectrometry metabolomics technology was conducted on the serum of SAH rats and identified 11 up-regulated and 26 down-regulated metabolites in positive ion model, and 1 up-regulated and 10 down-regulated metabolites in negative ion model. KEGG pathways analysis showed that differentially expressed metabolites were mainly enriched in pathways of bile secretion and primary bile acid biosynthesis. We systematically depicted the neuro- and metabolism-related biomolecular changes occurring in the hypothalamus after SAH by performing transcriptomics and metabolomics studies. These biomolecular changes may provide new insights into hypothalamus-induced metabolic changes and gene expression after SAH.

Indexed as

HypothalamusMetabolomicsRats, Sprague-DawleySubarachnoid HemorrhageTranscriptomeAnimalsGene Expression ProfilingMaleMetabolomeRatsHypothalamusMetabolomicsSubarachnoid hemorrhageTranscriptomics

Identifiers

PMID38842661
PMCPMC11233374

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.