Evidence map›Paper›PMID 38840061›Full record

ArticleBMC plant biology2024

Low oxygen environment effect on the tomato cell wall composition during the fruit ripening process.

Agata Leszczuk, Nataliia Kutyrieva-Nowak, Artur Nowak, Artur Nosalewicz, Artur Zdunek

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Agata LeszczukInstitute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin, 20-290, Poland. a.leszczuk@ipan.lublin.pl.
Nataliia Kutyrieva-NowakInstitute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin, 20-290, Poland.
Artur NowakDepartment of Industrial and Environmental Microbiology, Institute of Biological Sciences, Maria Curie- Skłodowska University, Akademicka 19, Lublin, 20-033, Poland.
Artur NosalewiczInstitute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin, 20-290, Poland.
Artur ZdunekInstitute of Agrophysics, Polish Academy of Sciences, Doświadczalna 4, Lublin, 20-290, Poland.

Funding

Narodowe Centrum Nauki 2020/39/D/NZ9/00232
6 · The paper itself

Abstract

backgroundOxygen concentration is a key characteristic of the fruit storage environment determining shelf life and fruit quality. The aim of the work was to identify cell wall components that are related to the response to low oxygen conditions in fruit and to determine the effects of such conditions on the ripening process. Tomato (Solanum lycopersicum) fruits at different stages of the ripening process were stored in an anoxic and hypoxic environment, at 0% and 5% oxygen concentrations, respectively. We used comprehensive and comparative methods: from microscopic immunolabelling and estimation of enzymatic activities to detailed molecular approaches. Changes in the composition of extensin, arabinogalactan proteins, rhamnogalacturonan-I, low methyl-esterified homogalacturonan, and high methyl-esterified homogalacturonan were analysed.

resultsIn-depth molecular analyses showed that low oxygen stress affected the cell wall composition, i.e. changes in protein content, a significantly modified in situ distribution of low methyl-esterified homogalacturonan, appearance of callose deposits, disturbed native activities of β-1,3-glucanase, endo-β-1,4-glucanase, and guaiacol peroxidase (GPX), and disruptions in molecular parameters of single cell wall components. Taken together, the data obtained indicate that less significant changes were observed in fruit in the breaker stage than in the case of the red ripe stage. The first symptoms of changes were noted after 24 h, but only after 72 h, more crucial deviations were visible. The 5% oxygen concentration slows down the ripening process and 0% oxygen accelerates the changes taking place during ripening.

conclusionsThe observed molecular reset occurring in tomato cell walls in hypoxic and anoxic conditions seems to be a result of regulatory and protective mechanisms modulating ripening processes.

Indexed as

Cell WallFruitOxygenPectinsPlant ProteinsSolanum lycopersicumMucoproteinsarabinogalactan proteinsMucoproteinsOxygenPectinsPlant Proteinspolygalacturonic acidAnoxiaCell wallFruitHypoxiaPolysaccharidesRipening process

Identifiers

PMID38840061
PMCPMC11155102

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.