Evidence map›Paper›PMID 38839806›Full record

ArticleScientific data2024

A Transcriptomic Dataset of Embryonic Murine Telencephalon.

Shohei Ochi, Shyu Manabe, Takako Kikkawa, Sara Ebrahimiazar, Ryuichi Kimura, Kaichi Yoshizaki, Noriko Osumi

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shohei Ochi *Department of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0000-0003-3602-439X
Shyu Manabe *Department of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0009-0009-4324-5722
Takako KikkawaDepartment of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0000-0002-6643-8289
Sara EbrahimiazarDepartment of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0009-0007-1461-6964
Ryuichi KimuraDepartment of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0000-0002-1090-7162
Kaichi YoshizakiDepartment of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan.ORCID 0000-0002-2540-332X
Noriko OsumiDepartment of Developmental Neuroscience, Tohoku University Graduate School of Medicine, Sendai, 980-8575, Japan. noriko.osumi.c7@tohoku.ac.jp.ORCID 0000-0003-0548-6452

Funding

Japan Agency for Medical Research and Development (AMED) JP21wm0425003MEXT | Japan Society for the Promotion of Science (JSPS) 16H06530MEXT | Japan Society for the Promotion of Science (JSPS) JP23KJ0193MEXT | Japan Society for the Promotion of Science (JSPS) JP30884217
6 · The paper itself

Abstract

Sex bias is known in the prevalence/pathology of neurodevelopmental disorders. Sex-dependent differences of the certain brain areas are known to emerge perinatally through the exposure to sex hormones, while gene expression patterns in the rodent embryonic brain does not seem to be completely the same between male and female. To investigate potential sex differences in gene expression and cortical organization during the embryonic period in mice, we conducted a comprehensive analysis of gene expression for the telencephalon at embryonic day (E) 11.5 (a peak of neural stem cell expansion) and E14.5 (a peak of neurogenesis) using bulk RNA-seq data. As a result, our data showed the existence of notable sex differences in gene expression patterns not obviously at E11.5, but clearly at E14.5 when neurogenesis has become its peak. These data can be useful for exploring potential contribution of genes exhibiting sex differences to the divergence in brain development. Additionally, our data underscore the significance of studying the embryonic period to gain a deeper understanding of sex differences in brain development.

Indexed as

TelencephalonTranscriptomeAnimalsFemaleMaleMiceNeurogenesisSex Characteristics

Identifiers

PMID38839806
PMCPMC11153524

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.