Evidence map›Paper›PMID 38839805›Full record

ArticleScientific reports2024

A Bacillus velezensis strain isolated from oats with disease-preventing and growth-promoting properties.

Chao Cheng, Shaofeng Su, Suling Bo, Chengzhong Zheng, Chunfang Liu, Linchong Zhang, Songhe Xu, Xiaoyun Wang, Pengfei Gao, Kongxi Fan and 5 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Chao Cheng *School of Life Science and Technology, Jining Normal University, Ulanqab, 012000, China. chaocheng101@163.com.
Shaofeng Su *Inner Mongolia Academy of Agriculture and Husbandry Science, Key Laboratory of Black Soil Protection and Utilization, Ministry of Agriculture and Rural Affairs, Hohhot, 010000, China.
Suling Bo *College of Computer Information, Inner Mongolia Medical University, Hohhot, 010000, China.
Chengzhong ZhengUlanqab Institute for Agricultural and Forestry Science, Ulanqab, 012000, China.
Chunfang LiuUlanqab Center for Disease Control and Prevention, Ulanqab, 012000, China.
Linchong ZhangJinyu Baoling Biological Drugs Co., LTD, Hohhot, 010000, China.
Songhe XuSchool of Life Science and Technology, Jining Normal University, Ulanqab, 012000, China.
Xiaoyun WangSchool of Life Science and Technology, Jining Normal University, Ulanqab, 012000, China.
Pengfei GaoVocational and Technical College of Ulanqab, Ulanqab, 012000, China.
Kongxi FanInner Mongolia Agricultural University, Hohhot, 010000, China.
Yiwei HeSchool of Life Science and Technology, Jining Normal University, Ulanqab, 012000, China.
Di ZhouThe Second Affiliated Hospital of Inner Mongolia Medical University, Hohhot, 010000, China.
Yanchun GongAgriculture and Animal Husbandry Technology Promotion Center of Inner Mongolia, Hohhot, 010000, China.
Gang ZhongAgriculture and Animal Husbandry Technology Promotion Center of Inner Mongolia, Hohhot, 010000, China.
Zhiguo LiuInner Mongolia Agricultural University, Hohhot, 010000, China. liuzhiguo@icdc.cn.

Funding

Inner Mongolia Agricultural and Animal Husbandry Science and Technology Innovation Fund 2022CXJJM04Inner Mongolia Autonomous Region Science and Technology Program project 2021GG0288National demonstration base for attracting talents and intelligence (Agriculture and rural revitalization) J2018401Ordos City science and technology planning project 2022YY033
6 · The paper itself

Abstract

Endophytes have been shown to promote plant growth and health. In the present study, a Bacillus velezensis CH1 (CH1) strain was isolated and identified from high-quality oats, which was capable of producing indole-3-acetic acid (IAA) and strong biofilms, and capabilities in the nitrogen-fixing and iron carriers. CH1 has a 3920 kb chromosome with 47.3% GC content and 3776 code genes. Compared genome analysis showed that the largest proportion of the COG database was metabolism-related (44.79%), and 1135 out of 1508 genes were associated with the function "biosynthesis, transport, and catabolism of secondary metabolites." Furthermore, thirteen gene clusters had been identified in CH1, which were responsible for the synthesis of fifteen secondary metabolites that exhibit antifungal and antibacterial properties. Additionally, the strain harbors genes involved in plant growth promotion, such as seven putative genes for IAA production, spermidine and polyamine synthase genes, along with multiple membrane-associated genes. The enrichment of these functions was strong evidence of the antimicrobial properties of strain CH1, which has the potential to be a biofertilizer for promoting oat growth and disease resistance.

Indexed as

AvenaBacillusIndoleacetic AcidsBiofilmsEndophytesGenome, BacterialNitrogen FixationPhylogenyPlant Diseasesindoleacetic acidIndoleacetic AcidsAntibacterial activityBacillus velezensisComparative genomeComplete genome

Identifiers

PMID38839805
PMCPMC11153497

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.