Evidence map›Paper›PMID 38838920›Full record

ArticleBioorganic & medicinal chemistry letters2024

Kinase-catalyzed crosslinking: A comparison of ATP-crosslinker analogs.

Hannah J Bremer, Andrew A Herppich, Mary Kay H Pflum

Abstract readComparative Study
In one paragraph

Article in Bioorganic & medicinal chemistry letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Hannah J BremerWayne State University, Department of Chemistry, 5101 Cass Ave., Detroit, MI 48202, United States.
Andrew A HerppichWayne State University, Department of Chemistry, 5101 Cass Ave., Detroit, MI 48202, United States.
Mary Kay H PflumWayne State University, Department of Chemistry, 5101 Cass Ave., Detroit, MI 48202, United States. Electronic address: pflum@wayne.edu.

Funding

Chemical Approaches to Study Protein Post-Translational ModificationsR35GM131821 · NIGMS · WAYNE STATE UNIVERSITY · PI Mary Kay H Pflum · 2019 to 2026
$4.3M
Chemistry Biology Interface Training Program at Wayne State UniversityT32GM142519 · NIGMS · WAYNE STATE UNIVERSITY · PI CHOW, CHRISTINE S, PFLUM, MARY KAY H · 2021 to 2025
$1.2M
NIGMS NIH HHS R35 GM131821NIGMS NIH HHS T32 GM142519
6 · The paper itself

Abstract

Protein phosphorylation is catalyzed by kinases to regulate cellular events and disease states. Identifying kinase-substrate relationships represents a powerful strategy to understand cell biology and disease yet remains challenging due to the rapid dynamics of phosphorylation. Over the last decade, several γ-phosphoryl modified ATP analogs containing crosslinkers were developed to covalently conjugate kinases, their substrates, and their associated proteins for subsequent characterization. Here, kinetics and crosslinking experiments demonstrated that the UV-activated analogs, ATP-aryl azide and ATP-benzophenone, offered the most robust crosslinking, whereas electrophilic ATP-aryl fluorosulfate promoted the most effective proximity-enabled crosslinking. The data will guide future applications of kinase-catalyzed crosslinking to study normal and disease biology.

Indexed as

Adenosine TriphosphateCross-Linking ReagentsAzidesBenzophenonesHumansKineticsMolecular StructurePhosphorylationAdenosine TriphosphateAzidesbenzophenoneBenzophenonesCross-Linking ReagentsATP analogsCrosslinkingKinaseKinase substrates

Identifiers

PMID38838920
PMCPMC11305616

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.