Evidence map›Paper›PMID 38834165›Full record

ArticleMethods (San Diego, Calif.)2024

Copper catalyzed cycloaddition for the synthesis of non isomerisable 2' and 3'-regioisomers of arg-tRNA

Yusif Afandizada, Thilini Abeywansha, Vincent Guerineau, Yi Zhang, Bruno Sargueil, Luc Ponchon, Laura Iannazzo, Mélanie Etheve-Quelquejeu

Abstract read
In one paragraph

Article in Methods (San Diego, Calif.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yusif AfandizadaUniversité Paris Cité, CNRS, Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, F-75006 Paris, France.
Thilini AbeywanshaDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH 44106, USA.
Vincent GuerineauUniversité Paris-Saclay, CNRS, Institut de Chimie des Substances Naturelles, UPR 2301, 91198 Gif-sur-Yvette, France.
Yi ZhangDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH 44106, USA.
Bruno SargueilUniversité Paris Cité, CNRS, UMR 8038/CiTCoM, F-75006 Paris, France.
Luc PonchonUniversité Paris Cité, CNRS, UMR 8038/CiTCoM, F-75006 Paris, France. Electronic address: luc.ponchon@u-paris.fr.
Laura IannazzoUniversité Paris Cité, CNRS, Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, F-75006 Paris, France. Electronic address: laura.iannazzo@u-paris.fr.
Mélanie Etheve-QuelquejeuUniversité Paris Cité, CNRS, Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, F-75006 Paris, France. Electronic address: etheve-Quelquejeu@u-paris.fr.

Funding

Arginyl-tRNA beyond translation: mechanism and regulation of protein arginylationR35GM150678 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI Yi Zhang · 2023 to 2026
$1.9M
NIGMS NIH HHS R35 GM150678
6 · The paper itself

Abstract

In this report, non-isomerisable analogs of arginine tRNA (Arg-triazole-tRNA) have been synthesized as tools to study tRNA-dependent aminoacyl-transferases. The synthesis involves the incorporation of 1,4 substituted-1,2,3 triazole ring to mimic the ester bond that connects the amino acid to the terminal adenosine in the natural substrate. The synthetic procedure includes (i) a coupling between 2'- or 3'-azido-adenosine derivatives and a cytidine phosphoramidite to access dinucleotide molecules, (ii) Cu-catalyzed cycloaddition reactions between 2'- or 3'-azido dinucleotide in the presence of an alkyne molecule mimicking the arginine, providing the corresponding Arg-triazole-dinucleotides, (iii) enzymatic phosphorylation of the 5'-end extremity of the Arg-triazole-dinucleotides with a polynucleotide kinase, and (iv) enzymatic ligation of the 5'-phosphorylated dinucleotides with a 23-nt RNA micro helix that mimics the acceptor arm of arg-tRNA or with a full tRNA

Indexed as

CopperCycloaddition ReactionAdenosineAminoacyltransferasesArginineCatalysisPhosphorylationRNA, Transfer, ArgStereoisomerismTriazolesAdenosineAminoacyltransferasesArginineCopperRNA, Transfer, ArgTriazoles

Identifiers

PMID38834165
PMCPMC13283360

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.