Evidence map›Paper›PMID 38831696›Full record

ArticleeLife2024

Syntaxin 17 recruitment to mature autophagosomes is temporally regulated by PI4P accumulation.

Saori Shinoda, Yuji Sakai, Takahide Matsui, Masaaki Uematsu, Ikuko Koyama-Honda, Jun-Ichi Sakamaki, Hayashi Yamamoto, Noboru Mizushima

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Regulation and roles of mammalian mitophagy.Nature reviews. Molecular cell biology · 2026
    Review
  2. Review
  3. Article
  4. Subcellular Cartography of the Phosphoinositide Multiverse.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2026
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
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  11. Article
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  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. A matter of timing.eLife · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Saori ShinodaDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0009-0007-7366-7147
Yuji SakaiDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0002-2184-4304
Takahide MatsuiDepartment of Molecular Oncology, Institute for Advanced Medical Sciences, Nippon Medical School, Tokyo, Japan.ORCID https://orcid.org/0000-0002-3342-0170
Masaaki UematsuDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0002-0197-8401
Ikuko Koyama-HondaDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0001-9321-9682
Jun-Ichi SakamakiDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.
Hayashi YamamotoDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0002-2831-1463
Noboru MizushimaDepartment of Biochemistry and Molecular Biology, Graduated School of Medicine, The University of Tokyo, Tokyo, Japan.ORCID https://orcid.org/0000-0002-6258-6444

Funding

Exploratory Research for Advanced Technology JPMJER1702Japan Society for the Promotion of Science 17J02747Japan Society for the Promotion of Science 21H05256Japan Society for the Promotion of Science 22H04919Japan Society for the Promotion of Science 23K05715
6 · The paper itself

Abstract

During macroautophagy, cytoplasmic constituents are engulfed by autophagosomes. Lysosomes fuse with closed autophagosomes but not with unclosed intermediate structures. This is achieved in part by the late recruitment of the autophagosomal SNARE syntaxin 17 (STX17) to mature autophagosomes. However, how STX17 recognizes autophagosome maturation is not known. Here, we show that this temporally regulated recruitment of STX17 depends on the positively charged C-terminal region of STX17. Consistent with this finding, mature autophagosomes are more negatively charged compared with unclosed intermediate structures. This electrostatic maturation of autophagosomes is likely driven by the accumulation of phosphatidylinositol 4-phosphate (PI4P) in the autophagosomal membrane. Accordingly, dephosphorylation of autophagosomal PI4P prevents the association of STX17 to autophagosomes. Furthermore, molecular dynamics simulations support PI4P-dependent membrane insertion of the transmembrane helices of STX17. Based on these findings, we propose a model in which STX17 recruitment to mature autophagosomes is temporally regulated by a PI4P-driven change in the surface charge of autophagosomes.

Indexed as

AutophagosomesPhosphatidylinositol PhosphatesQa-SNARE ProteinsAutophagyHumansMolecular Dynamics Simulationphosphatidylinositol 4-phosphatePhosphatidylinositol PhosphatesQa-SNARE ProteinsSTX17 protein, humanautophagosomeautophagycell biologyhumanmembrane chargemousephosphatidylinositol 4-phosphateSNAREsyntaxin 17

Identifiers

PMID38831696
PMCPMC11152571

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.