Evidence map›Paper›PMID 38831419›Full record

ArticleBMC infectious diseases2024

Two biases in incubation time estimation related to exposure.

Vera H Arntzen, Marta Fiocco, Ronald B Geskus

Abstract read
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Vera H ArntzenMathematical Institute, Leiden University, Leiden, the Netherlands. v.h.arntzen@math.leidenuniv.nl.ORCID http://orcid.org/0000-0002-2642-9898
Marta FioccoMathematical Institute, Leiden University, Leiden, the Netherlands.ORCID http://orcid.org/0000-0001-5588-0277
Ronald B GeskusCentre for Tropical Medicine, Oxford University Clinical Research Unit, Ho Chi Minh City, Viet Nam.ORCID http://orcid.org/0000-0002-2740-3155

Funding

RBG was supported by the Wellcome Trust 225167/Z/22/ZWellcome Trust
6 · The paper itself

Abstract

backgroundEstimation of the SARS-CoV-2 incubation time distribution is hampered by incomplete data about infection. We discuss two biases that may result from incorrect handling of such data. Notified cases may recall recent exposures more precisely (differential recall). This creates bias if the analysis is restricted to observations with well-defined exposures, as longer incubation times are more likely to be excluded. Another bias occurred in the initial estimates based on data concerning travellers from Wuhan. Only individuals who developed symptoms after their departure were included, leading to under-representation of cases with shorter incubation times (left truncation). This issue was not addressed in the analyses performed in the literature.

methodsWe performed simulations and provide a literature review to investigate the amount of bias in estimated percentiles of the SARS-CoV-2 incubation time distribution.

resultsDepending on the rate of differential recall, restricting the analysis to a subset of narrow exposure windows resulted in underestimation in the median and even more in the 95th percentile. Failing to account for left truncation led to an overestimation of multiple days in both the median and the 95th percentile.

conclusionWe examined two overlooked sources of bias concerning exposure information that the researcher engaged in incubation time estimation needs to be aware of.

Indexed as

BiasCOVID-19Infectious Disease Incubation PeriodSARS-CoV-2Computer SimulationHumansDifferential recallIncubation timeInterval censoringLeft truncationSARS-CoV-2

Identifiers

PMID38831419
PMCPMC11149330

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.