Evidence map›Paper›PMID 38827068›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2024

Electronic Phenotyping of Urinary Tract Infections as a Silver Standard Label for Machine Learning.

Stephen P Ma, Ebru Hosgur, Conor K Corbin, Ivan Lopez, Amy Chang, Jonathan H Chen

Abstract read
PubMed Full text at PMC
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Stephen P MaStanford University School of Medicine, Stanford, CA, USA.
Ebru HosgurStanford University School of Medicine, Stanford, CA, USA.
Conor K CorbinStanford University School of Medicine, Stanford, CA, USA.
Ivan LopezStanford University School of Medicine, Stanford, CA, USA.
Amy ChangStanford University School of Medicine, Stanford, CA, USA.
Jonathan H ChenStanford University School of Medicine, Stanford, CA, USA.

Funding

Measuring and Predicting Appropriate Antibiotic Use to Combat Resistant BacteriaR01AI178121 · NIAID · STANFORD UNIVERSITY · PI JONATHAN H. CHEN · 2023 to 2026
$3.1M
NIAID NIH HHS R01 AI178121
6 · The paper itself

Abstract

This study explored the efficacy of electronic phenotyping in data labeling for machine learning with a focus on urinary tract infections (UTIs). We contrasted labels from electronic phenotyping against previously published labels such as urine culture positivity. In comparison, electronic phenotyping showed the potential to enhance specificity in UTI labeling while maintaining similar sensitivity and was easily scaled for application to a large dataset suitable for machine learning, which we used to train and validate a machine learning model. Electronic phenotyping offers a valuable method for machine learning label generation in healthcare, with potential benefits for patient care and antimicrobial stewardship. Further research will expand its application and optimize techniques for increased performance.

Identifiers

PMID38827068
PMCPMC11141812

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.