Evidence map›Paper›PMID 38826379›Full record

ArticlebioRxiv : the preprint server for biology2024

Modeling epithelial homeostasis and perturbation in three-dimensional human esophageal organoids.

Masataka Shimonosono, Masaki Morimoto, Wataru Hirose, Yasuto Tomita, Norihiro Matsuura, Samuel Flashner, Mesra S Ebadi, Emilea H Okayasu, Christian Y Lee, William R Britton and 13 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors.

Masataka Shimonosono
Masaki Morimoto
Wataru Hirose
Yasuto Tomita
Norihiro Matsuura
Mesra S Ebadi
Emilea H Okayasu
Christian Y Lee
William R Britton
Cecilia Martin
Beverly R Wuertz
Anuraag S Parikh
Uma M Sachdeva
Frank G Ondrey
Venkatram R Atigadda
Craig A Elmets
Julian A Abrams
Amanda B Muir
Andres J Klein-Szanto
Kenneth I Weinberg
Fatemeh Momen-Heravi

Funding

Immune and transcriptomic biomarkers of progressive oral premalignant lesionsU01DE033351 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Fatemeh Momen Heravi · 2023 to 2026
$3.1M
NIDCR NIH HHS L30 DE029070NIDCR NIH HHS U01 DE033351
6 · The paper itself

Abstract

Background: Esophageal organoids from a variety of pathologies including cancer are grown in Advanced Dulbecco's Modified Eagle Medium-Nutrient Mixture F12 (hereafter ADF). However, the currently available ADF-based formulations are suboptimal for normal human esophageal organoids, limiting the ability to compare normal esophageal organoids with those representing a given disease state. Methods: We have utilized immortalized normal human esophageal epithelial cell (keratinocyte) lines EPC1 and EPC2 and endoscopic normal esophageal biopsies to generate three-dimensional (3D) organoids. To optimize ADF-based medium, we evaluated the requirement of exogenous epidermal growth factor (EGF) and inhibition of transforming growth factor-(TGF)-β receptor-mediated signaling, both key regulators of proliferation of human esophageal keratinocytes. We have modeled human esophageal epithelial pathology by stimulating esophageal 3D organoids with interleukin (IL)-13, an inflammatory cytokine, or UAB30, a novel pharmacological activator of retinoic acid signaling. Results: The formation of normal human esophageal 3D organoids was limited by excessive EGF and intrinsic TGFβ receptor-mediated signaling. In optimized HOME0, normal human esophageal organoid formation was improved, whereas IL-13 and UAB30 induced epithelial changes reminiscent of basal cell hyperplasia, a common histopathologic feature in broad esophageal disease conditions including eosinophilic esophagitis.

Identifiers

PMID38826379
PMCPMC11142071

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