Evidence map›Paper›PMID 38826348›Full record

ArticlemedRxiv : the preprint server for health sciences2025

Open-source computational pipeline automatically flags instances of acute respiratory distress syndrome from electronic health records.

Félix L Morales, Feihong Xu, Hyojun Ada Lee, Helio Tejedor Navarro, Meagan A Bechel, Eryn L Cameron, Jesse Kelso, Curtis H Weiss, Luís A Nunes Amaral

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Helio Tejedor NavarroORCID 0000-0001-5441-8101
Eryn L Cameron
Jesse Kelso
Luís A Nunes AmaralORCID 0000-0002-3762-789X

Funding

A novel data science and network analysis approach to quantifying facilitators and barriers of low tidal volume ventilation in an international consortium of medical centersR01HL140362 · NHLBI · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI WEISS, CURTIS H. · 2018 to 2022
$3.6M
A novel implementation and social network strategy for acute pulmonary illnessesK23HL118139 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WEISS, CURTIS H. · 2013 to 2017
$781k
NHLBI NIH HHS K23 HL118139NHLBI NIH HHS R01 HL140362
6 · The paper itself

Abstract

Physicians, particularly intensivists, face information overload and decision fatigue, underscoring the need for automated diagnostic tools. Acute Respiratory Distress Syndrome (ARDS) affects over 10% of critical care patients, with over 40% mortality rate, yet is only recognized in 30-70% of cases in clinical settings. We present a reproducible computational pipeline that automates ARDS adjudication in retrospective datasets of mechanically ventilated adults, implementing the Berlin Definition via natural language processing and classification algorithms. We used labeled chest imaging reports from two hospitals to train an XGBoost model to detect bilateral infiltrates, and a labeled subset of attending physician notes from one hospital to train another XGBoost model to detect a pneumonia diagnosis. Both models achieve high discriminative performance on test sets-an area under the receiver operating characteristic curve (AUROC) of 0.88 for adjudicating bilateral infiltrates on chest imaging reports, and an AUROC of 0.87 for detecting pneumonia on attending physician notes. We integrated these models with rule-based components and validated the entire pipeline on a subset of healthcare encounters from a third hospital (MIMIC-III). We find a sensitivity of 93.5% in adjudicating ARDS - far surpassing the 22.6% ARDS documentation rate we found for this cohort - along with a false positive rate of 17.4%. We conclude that our reproducible, automated pipeline holds promise for improving ARDS recognition and could aid clinical practice through real-time EHR integration.

Identifiers

PMID38826348
PMCPMC11142283

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.