Evidence map›Paper›PMID 38826347›Full record

ArticlebioRxiv : the preprint server for biology2024

The

William J Hutchison, Timothy J Keyes, tidyomics Consortium, Helena L Crowell, Jacques Serizay, Charlotte Soneson, Eric S Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton and 22 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

32 authors.

William J HutchisonWalter and Eliza Hall Institute of Medical Research, Division of Bioinformatics, Parkville, VIC 3052, Australia.ORCID 0009-0001-6242-4269
Timothy J KeyesStanford University School of Medicine, Department of Biomedical Data Science, USA.ORCID 0000-0003-0423-9679
tidyomics Consortium
Helena L CrowellUniversity of Zurich, Switzerland.ORCID 0000-0002-4801-1767
Jacques SerizayInstitut Pasteur, CNRS UMR3525, Unité Régulation Spatiale des Génomes, F-75015, Paris, France.ORCID 0000-0002-4295-0624
Charlotte SonesonFriedrich Miescher Institute for Biomedical Research, Basel, Switzerland.ORCID 0000-0003-3833-2169
Eric S DavisBioinformatics and Computational Biology Program, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Noriaki SatoDivision of Health Medical Intelligence, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Japan.ORCID 0000-0001-7721-9359
Lambda MosesCalifornia Institute of Technology, USA.
Boyd TarlintonQueensland Department of Agriculture and Fisheries, Australia.
Abdullah A NahidDepartment of Biochemistry and Molecular Biology, Shahjalal University of Science and Technology, Sylhet, Bangladesh.ORCID 0000-0002-4390-0768
Miha KosmacAchilles Therapeutics, UK.ORCID 0000-0002-5372-7233
Quentin ClayssenDNA Script, France.
Victor YuanDepartment of Statistics, The University of British Columbia, Canada.ORCID 0000-0002-3394-998X
Wancen MuBiostatistics Department, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.ORCID 0000-0002-5061-7581
Ji-Eun ParkBiostatistics Department, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.
Izabela MamedeDepartment of Biochemistry and Immunology, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil.
Min Hyung RyuChanning Division of Network Medicine, Department of Medicine, Brigham and Women's Hospital, USA.
Pierre-Paul AxisaUniversité de Toulouse, Inserm, CNRS, Université Toulouse III-Paul Sabatier, Centre de Recherches en Cancérologie de Toulouse, Toulouse, France.ORCID 0000-0003-1446-3922
Paulina PaizStanford University School of Medicine, Department of Biomedical Data Science, USA.
Chi-Lam PoonDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.ORCID 0000-0001-6298-7099
Ming TangImmunitas Therapeutics, USA.ORCID 0000-0002-7739-8913
Raphael GottardoUniversity of Lausanne, Switzerland.ORCID 0000-0002-3867-0232
Martin MorganRoswell Park Comprehensive Cancer Center, USA.ORCID 0000-0002-5874-8148
Stuart LeeGenentech, Department of Bioinformatics and Computational Biology, USA.ORCID 0000-0003-1179-8436
Michael LawrenceGenentech, Department of Bioinformatics and Computational Biology, USA.
Stephanie C HicksDepartment of Biostatistics, Johns Hopkins University, USA.ORCID 0000-0002-7858-0231
Garry P NolanStanford University School of Medicine, Department of Pathology, USA.ORCID 0000-0002-8862-9043
Kara L DavisStanford University School of Medicine, Department of Pediatrics, USA.ORCID 0000-0002-7182-2592
Anthony T PapenfussWalter and Eliza Hall Institute of Medical Research, Division of Bioinformatics, Parkville, VIC 3052, Australia.ORCID 0000-0002-1102-8506
Michael I LoveGenetics Department, University of North Carolina-Chapel Hill, Chapel Hill, NC, USA.ORCID 0000-0001-8401-0545
Stefano MangiolaWalter and Eliza Hall Institute of Medical Research, Division of Bioinformatics, Parkville, VIC 3052, Australia.ORCID 0000-0001-7474-836X

Funding

Project-002U41HG004059 · NHGRI · ROSWELL PARK CANCER INSTITUTE CORP · PI MORGAN, MARTIN T · 2011 to 2020
$13.2M
Cancer Genomics:Integrative and Scalable Solutions in R / BioconductorU24CA180996 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MORGAN, MARTIN T, WALDRON, LEVI · 2014 to 2023
$6.9M
NCI NIH HHS U24 CA180996NHGRI NIH HHS U41 HG004059
6 · The paper itself

Abstract

The growth of omic data presents evolving challenges in data manipulation, analysis, and integration. Addressing these challenges, Bioconductor

Identifiers

PMID38826347
PMCPMC11142095

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.