Evidence map›Paper›PMID 38826306›Full record

ArticleResearch square2024

VCP regulates early tau seed amplification via specific cofactors.

Sushobhna Batra, Jaime Iii Vaquer-Alicea, Clarissa Valdez, Skyler P Taylor, Victor A Manon, Anthony R Vega, Omar M Kashmer, Sourav Kolay, Andrew Lemoff, Nigel J Cairns and 2 more

Abstract readPreprint
In one paragraph

Article in Research square, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Sushobhna BatraUT Southwestern: The University of Texas Southwestern Medical Center.ORCID 0000-0002-0964-975X
Jaime Iii Vaquer-AliceaUT Southwestern: The University of Texas Southwestern Medical Center.
Clarissa ValdezUT Southwestern: The University of Texas Southwestern Medical Center.
Skyler P TaylorUT Southwestern: The University of Texas Southwestern Medical Center.
Victor A ManonUT Southwestern: The University of Texas Southwestern Medical Center.
Anthony R VegaUT Southwestern: The University of Texas Southwestern Medical Center.
Omar M KashmerUT Southwestern: The University of Texas Southwestern Medical Center.
Sourav KolayUT Southwestern: The University of Texas Southwestern Medical Center.
Andrew LemoffUT Southwestern: The University of Texas Southwestern Medical Center.
Nigel J CairnsUniversity of Exeter Faculty of Health and Life Sciences.
Charles L WhiteUT Southwestern: The University of Texas Southwestern Medical Center.
Marc I DiamondUT Southwestern: The University of Texas Southwestern Medical Center.

Funding

Identification and characterization of tau seeding and strain composition in tauopathyRF1AG059689 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI DIAMOND, MARC I, WHITE, CHARLES LEE · 2019 to 2019
$3.4M
Mechanism of cell uptake for pathogenic tau seedsR01AG071502 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI MARC I DIAMOND · 2022 to 2026
$3.4M
Mechanism of modulation of huntingtin exon 1 aggregation by profilinR01NS089932 · NINDS · WASHINGTON UNIVERSITY · PI DIAMOND, MARC I, LANGEN, RALF · 2016 to 2020
$2.8M
APEX2-mediated Identification of factors involved in seeding by tau proteinR21AG064418 · NIA · UT SOUTHWESTERN MEDICAL CENTER · PI DIAMOND, MARC I · 2020 to 2020
$449k
NIA NIH HHS R01 AG071502NIA NIH HHS R21 AG064418NIA NIH HHS RF1 AG059689NINDS NIH HHS R01 NS089932
6 · The paper itself

Abstract

Background: Neurodegenerative tauopathies may progress based on seeding by pathological tau assemblies, whereby an aggregate is released from one cell, gains entry to an adjacent or connected cell, and serves as a specific template for its own replication in the cytoplasm. In vitro seeding reactions typically take days, yet seeding into the complex cytoplasmic milieu happens within hours, implicating a machinery with unknown players that controls this process in the acute phase. Methods: We used proximity labeling to identify factors that control seed amplification within 5h of seed exposure. We fused split-APEX2 to the C-terminus of tau repeat domain (RD) to reconstitute peroxidase activity 5h after seeded intracellular tau aggregation. Valosin containing protein (VCP/p97) was the top hit. VCP harbors dominant mutations that underlie two neurodegenerative diseases, multisystem proteinopathy and vacuolar tauopathy, but its mechanistic role is unclear. We used immortalized cells and human neurons to study the effects of VCP on tau seeding. We exposed cells to fibrils or brain homogenates in cell culture media and measured effects on uptake and induction of intracellular tau aggregation following various genetic and chemical manipulations of VCP. Results: VCP knockdown reduced tau seeding. Chemical inhibitors had opposing effects on aggregation in HEK293T tau biosensor cells and human neurons alike: ML-240 increased seeding efficiency, whereas NMS-873 decreased it. The inhibitors were effective only when administered within 8h of seed exposure, indicating a role for VCP early in seed processing. We screened 30 VCP co-factors in HEK293T biosensor cells by genetic knockout or knockdown. Reduction of ATXN3, NSFL1C, UBE4B, NGLY1, and OTUB1 decreased tau seeding, as did NPLOC4, which also uniquely increased soluble tau levels. By contrast, reduction of FAF2 increased tau seeding. Conclusions: Divergent effects on tau seeding of chemical inhibitors and cofactor reduction indicate that VCP regulates this process. This is consistent with a dedicated cytoplasmic processing complex based on VCP that directs seeds acutely towards degradation vs. amplification.

Indexed as

APEX2CofactorsDisaggregasep97SeedingTauVCP

Identifiers

PMID38826306
PMCPMC11142303

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.