Evidence map›Paper›PMID 38826193›Full record

ArticlebioRxiv : the preprint server for biology2024

Sex-specific expression of the human NAFLD-NASH transcriptional signatures in the liver of medaka with a history of ancestral bisphenol A exposure.

Sourav Chakraborty, Santosh Anand, Ramji Kumar Bhandari

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sourav ChakrabortyDivision of Biological Sciences, University of Missouri, Columbia, MO 65211, U.S.A.
Santosh AnandDivision of Biological Sciences, University of Missouri, Columbia, MO 65211, U.S.A.
Ramji Kumar BhandariDivision of Biological Sciences, University of Missouri, Columbia, MO 65211, U.S.A.ORCID 0000-0001-5608-7254

Funding

Germline transmission of epigenetic alterations to offspringR01ES032452 · NIEHS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI Ramji Kumar Bhandari · 2022 to 2026
$1.7M
Germline transmission of epigenetic alterations to offspring induced by bisphenol A exposureR21ES027123 · NIEHS · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI BHANDARI, RAMJI KUMAR · 2017 to 2019
$490k
Correction of endocrine disruptor-induced transgenerational epimutations by CRISPR-dCas9R21HD098621 · NICHD · UNIVERSITY OF NORTH CAROLINA GREENSBORO · PI BHANDARI, RAMJI KUMAR · 2020 to 2021
$400k
NICHD NIH HHS R21 HD098621NIEHS NIH HHS R01 ES032452NIEHS NIH HHS R21 ES027123
6 · The paper itself

Abstract

The progression of fatty liver disease to non-alcoholic steatohepatitis (NASH) is a leading cause of death in humans. Lifestyles and environmental chemical exposures can increase the susceptibility of humans to NASH. In humans, the presence of bisphenol A (BPA) in urine is associated with fatty liver disease, but whether ancestral BPA exposure leads to the activation of human NAFLD-NASH-associated genes in the unexposed descendants is unclear. In this study, using medaka fish as an animal model for human NAFLD, we investigated the transcriptional signatures of human NAFLD-NASH and their associated roles in the pathogenesis of the liver of fish who were not directly exposed but their ancestors were exposed to BPA during embryonic and perinatal development three generations prior. Comparison of bulk RNA-Seq data of the liver in BPA lineage male and female medaka with publicly available human NAFLD-NASH patient data revealed transgenerational alterations in the transcriptional signature of human NAFLD-NASH in medaka liver. Twenty percent of differentially expressed genes (DEGs) were upregulated in both human NAFLD patients and medaka. Specifically in females, among the total shared DEGs in the liver of BPA lineage fish and NAFLD patient groups, 27.69% DEGs were downregulated and 20% DEGs were upregulated. Off all DEGs, 52.31% DEGs were found in ancestral BPA-lineage females, suggesting that NAFLD in females shared majority of human NAFLD gene networks. Pathway analysis revealed beta-oxidation, lipoprotein metabolism, and HDL/LDL-mediated transport processes linked to downregulated DEGs in BPA lineage males and females. In contrast, the expression of genes encoding lipogenesis-related proteins was significantly elevated in the liver of BPA lineage females only. BPA lineage females exhibiting activation

Indexed as

BPAHumanLiverMedakaNAFLDNASHTranscriptsTransgenerational

Identifiers

PMID38826193
PMCPMC11142124

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.