Evidence map›Paper›PMID 38824508›Full record

ArticleBMC infectious diseases2024

Emergence of Eurasian Avian-Like Swine Influenza A (H1N1) virus in a child in Shandong Province, China.

Yujie He, Shaoxia Song, Jie Wu, Julong Wu, Lifang Zhang, Lin Sun, Zhong Li, Xianjun Wang, Zengqiang Kou, Ti Liu

Abstract readCase Reports
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yujie He *Shandong Provincial Center for Disease Prevention and Control, Jinan, China.
Shaoxia Song *Shandong Provincial Center for Disease Prevention and Control, Jinan, China.
Jie Wu *Binzhou Center for Disease Prevention and Control, Binzhou, China.
Julong WuShandong Provincial Center for Disease Prevention and Control, Jinan, China.
Lifang ZhangBinzhou Center for Disease Prevention and Control, Binzhou, China.
Lin SunShandong Provincial Center for Disease Prevention and Control, Jinan, China.
Zhong LiShandong Provincial Center for Disease Prevention and Control, Jinan, China.
Xianjun WangShandong Provincial Center for Disease Prevention and Control, Jinan, China.
Zengqiang KouShandong Provincial Center for Disease Prevention and Control, Jinan, China.
Ti LiuShandong Provincial Center for Disease Prevention and Control, Jinan, China. liuti1204@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInfluenza A virus infections can occur in multiple species. Eurasian avian-like swine influenza A (H1N1) viruses (EAS-H1N1) are predominant in swine and occasionally infect humans. A Eurasian avian-like swine influenza A (H1N1) virus was isolated from a boy who was suffering from fever; this strain was designated A/Shandong-binzhou/01/2021 (H1N1). The aims of this study were to investigate the characteristics of this virus and to draw attention to the need for surveillance of influenza virus infection in swine and humans.

methodsThroat-swab specimens were collected and subjected to real-time fluorescent quantitative polymerase chain reaction (RT‒PCR). Positive clinical specimens were inoculated onto Madin-Darby canine kidney (MDCK) cells to isolate the virus, which was confirmed by a haemagglutination assay. Then, whole-genome sequencing was carried out using an Illumina MiSeq platform, and phylogenetic analysis was performed with MEGA X software.

resultsRT‒PCR revealed that the throat-swab specimens were positive for EAS-H1N1, and the virus was subsequently successfully isolated from MDCK cells; this strain was named A/Shandong-binzhou/01/2021 (H1N1). Whole-genome sequencing and phylogenetic analysis revealed that A/Shandong-binzhou/01/2021 (H1N1) is a novel triple-reassortant EAS-H1N1 lineage that contains gene segments from EAS-H1N1 (HA and NA), triple-reassortant swine influenza H1N2 virus (NS) and A(H1N1) pdm09 viruses (PB2, PB1, PA, NP and MP).

conclusionsThe isolation and analysis of the A/Shandong-binzhou/01/2021 (H1N1) virus provide further evidence that EAS-H1N1 poses a threat to human health, and greater attention should be given to the surveillance of influenza virus infections in swine and humans.

Indexed as

Influenza A Virus, H1N1 SubtypeInfluenza, HumanPhylogenyAnimalsChildChinaDogsGenome, ViralHumansMadin Darby Canine Kidney CellsMaleOrthomyxoviridae InfectionsSwineWhole Genome SequencingEAS-H1N1Influenza A virusMolecular characteristicsPhylogenetic analysisTriple-reassortant

Identifiers

PMID38824508
PMCPMC11143696

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.