Evidence map›Paper›PMID 38821490›Full record

ArticleAnalytical chemistry2024

High-Resolution Raman Imaging of >300 Patient-Derived Cells from Nine Different Leukemia Subtypes: A Global Clustering Approach.

Renzo Vanna, Andrea Masella, Manuela Bazzarelli, Paola Ronchi, Aufried Lenferink, Cristina Tresoldi, Carlo Morasso, Marzia Bedoni, Giulio Cerullo, Dario Polli and 4 more

Abstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Renzo VannaIstituto di Fotonica e Nanotecnologie - Consiglio Nazionale delle Ricerche (IFN-CNR), c/o Politecnico di Milano, Milan 20133, Italy.ORCID 0000-0001-6218-8393
Andrea MasellaDatrix S.p.A., Milan 20121, Italy.ORCID 0009-0002-8404-5531
Manuela BazzarelliDatrix S.p.A., Milan 20121, Italy.
Paola RonchiIRCCS Ospedale San Raffaele, University Vita-Salute San Raffaele, Milan 20132, Italy.
Aufried LenferinkMedical Cell BioPhysics, Department of Science and Technology, TechMed Center, University of Twente, Enschede, NL 7500 AE, The Netherlands.
Cristina TresoldiIRCCS Ospedale San Raffaele, University Vita-Salute San Raffaele, Milan 20132, Italy.
Carlo MorassoIstituti Clinici Scientifici Maugeri IRCCS, Via Maugeri 4, Pavia 27100, Italy.ORCID 0000-0001-9185-0198
Marzia BedoniIRCCS, Fondazione Don Carlo Gnocchi, Milan 20148, Italy.
Giulio CerulloIstituto di Fotonica e Nanotecnologie - Consiglio Nazionale delle Ricerche (IFN-CNR), c/o Politecnico di Milano, Milan 20133, Italy.ORCID 0000-0002-9534-2702
Dario PolliIstituto di Fotonica e Nanotecnologie - Consiglio Nazionale delle Ricerche (IFN-CNR), c/o Politecnico di Milano, Milan 20133, Italy.ORCID 0000-0002-6960-5708
Fabio CiceriIRCCS Ospedale San Raffaele, University Vita-Salute San Raffaele, Milan 20132, Italy.
Giulia De PoliDatrix S.p.A., Milan 20121, Italy.
Matteo BregonzioDatrix S.p.A., Milan 20121, Italy.
Cees OttoMedical Cell BioPhysics, Department of Science and Technology, TechMed Center, University of Twente, Enschede, NL 7500 AE, The Netherlands.ORCID 0000-0001-6955-4843

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leukemia comprises a diverse group of bone marrow tumors marked by cell proliferation. Current diagnosis involves identifying leukemia subtypes through visual assessment of blood and bone marrow smears, a subjective and time-consuming method. Our study introduces the characterization of different leukemia subtypes using a global clustering approach of Raman hyperspectral maps of cells. We analyzed bone marrow samples from 19 patients, each presenting one of nine distinct leukemia subtypes, by conducting high spatial resolution Raman imaging on 319 cells, generating over 1.3 million spectra in total. An automated preprocessing pipeline followed by a single-step global clustering approach performed over the entire data set identified relevant cellular components (cytoplasm, nucleus, carotenoids, myeloperoxidase (MPO), and hemoglobin (HB)) enabling the unsupervised creation of high-quality pseudostained images at the single-cell level. Furthermore, this approach provided a semiquantitative analysis of cellular component distribution, and multivariate analysis of clustering results revealed the potential of Raman imaging in leukemia research, highlighting both advantages and challenges associated with global clustering.

Indexed as

LeukemiaSpectrum Analysis, RamanCluster AnalysisHumansPeroxidasePeroxidase

Identifiers

PMID38821490
PMCPMC11170555

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.