Evidence map›Paper›PMID 38820892›Full record

ArticleJournal of infection and public health2024

Exploring the Chikungunya virus landscape in a dengue-endemic Brazilian area.

Debora Glenda Lima de La Roque, Elaine Vieira Santos, Lucca Rocha Policastro, Péricles Natan Mendes da Costa, Mariane Evaristo, Aparecida Yulie Yamamoto, Denise Bergamaschi Giomo, Paula Marilia Afonso Torres, Danielle Cristina Dacanal Gentil, Elaine Cristina Manini Minto and 12 more

Abstract read
In one paragraph

Article in Journal of infection and public health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Debora Glenda Lima de La RoqueBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil; Medical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Elaine Vieira SantosButantan Institute, São Paulo, Brazil.
Lucca Rocha PolicastroBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil; Medical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Péricles Natan Mendes da CostaBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil.
Mariane EvaristoBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil.
Aparecida Yulie YamamotoMedical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Denise Bergamaschi GiomoDivisão de Vigilância Epidemiológica/Departamento de Vigilância em Saúde, Ribeirão Preto, Brazil.
Paula Marilia Afonso TorresDivisão de Vigilância Epidemiológica/Departamento de Vigilância em Saúde, Ribeirão Preto, Brazil.
Danielle Cristina Dacanal GentilDivisão de Vigilância Epidemiológica/Departamento de Vigilância em Saúde, Ribeirão Preto, Brazil.
Elaine Cristina Manini MintoServiços de Exames Laboratoriais, Secretaria da Saúde de Ribeirão Preto, Ribeirão Preto, Brazil.
Svetoslav Nanev SlavovButantan Institute, São Paulo, Brazil.
Vagner FonsecaPan-American Health Organization (PAHO)/World Health Organization (WHO), USA.
Claudia Renata Dos Santos BarrosButantan Institute, São Paulo, Brazil.
Antonio Jorge MartinsButantan Institute, São Paulo, Brazil.
Rodrigo Tocantins CaladoBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil; Medical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Luzia Márcia Romanholi PassosDivisão de Vigilância Epidemiológica/Departamento de Vigilância em Saúde, Ribeirão Preto, Brazil.
Maria Carolina EliasButantan Institute, São Paulo, Brazil.
Sandra Coccuzzo SampaioButantan Institute, São Paulo, Brazil.
Marta GiovanettiSciences and Technologies for Sustainable Development and One Health, University of Campus Bio-Medico, Rome, Italy; Instituto Rene Rachou, Fundação Oswaldo Cruz, Minas Gerais, Brazil; Climate Amplified Diseases and Epidemics (CLIMADE), Brazil.
Dimas Tadeu CovasBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil; Medical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Luiz Carlos Júnior AlcântaraInstituto Rene Rachou, Fundação Oswaldo Cruz, Minas Gerais, Brazil; Climate Amplified Diseases and Epidemics (CLIMADE), Brazil.
Simone KashimaBlood Center of Ribeirão Preto, Ribeirão Preto, São Paulo, Brazil; Medical School of Ribeirão Preto, Ribeirão Preto, University of São Paulo, São Paulo, Brazil. Electronic address: skashima@hemocentro.fmrp.usp.br.

Funding

World Health Organization 001
6 · The paper itself

Abstract

We aimed to describe the landscape, including molecular, epidemiological, and clinical aspects of CHIKV infections in the Ribeirao Preto region, an area endemic to dengue. We randomly screened 3744 plasma samples that had undergone DENV diagnosis to evaluate CHIKV-RNA using an in-house RT-PCR assay. Positive samples were followed clinically, and RNA samples were submitted to whole genome sequencing. Seventeen cases (0.5 %) were positive for CHIKV-RNA despite being negative for DENV-RNA. Notably, half of the patients experienced prolonged arthralgia lasting more than 90 days. Compared with the healthy control group, leukopenia and thrombocytopenia were observed in all CHIKV-positive individuals with statistically significant P values (P < 0.0001 and P = 0.0003, respectively). The genomic analysis revealed that the CHIKV strains being studied are classified within the East-Central-South-African (ECSA) genotype. This analysis identified new mutations, E1: K211E and E2: V264A, while the previously known mutation E1: A226V was not detected among these strains. This study highlights the need for epidemiological surveillance and preparedness for potential CHIKV epidemics in Brazil, particularly where other arboviruses co-circulate.

Indexed as

Chikungunya FeverChikungunya virusDengueGenotypeRNA, ViralAdolescentAdultAgedBrazilChildChild, PreschoolDengue VirusEndemic DiseasesFemaleHumansMaleRNA, ViralArbovirusChikungunya virusMolecular epidemiologyPhylogeny

Identifiers

PMID38820892
PMCPMC11187577

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.