Evidence map›Paper›PMID 38820284›Full record

ArticlePloS one2024

Bacterial and fungal communities in chronic rhinosinusitis with nasal polyps.

Eray Uzunoğlu, Ayşe Kalkancı, Esra Kılıç, Yusuf Kızıl, Utku Aydil, Kadir Serdar Diker, Süleyman Sabri Uslu

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Clinical, laboratory, and histopathological factors associated with revision surgery in chronic rhinosinusitis with nasal polyps.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Eray UzunoğluDepartment of Otorhinolaryngology, Izmir Ekol Hospital, İzmir, Turkey.ORCID 0000-0002-8920-1364
Ayşe KalkancıDepartment of Medical Microbiology, Gazi University Hospital, Ankara, Turkey.ORCID 0000-0003-0961-7325
Esra KılıçDepartment of Medical Microbiology, Gazi University Hospital, Ankara, Turkey.
Yusuf KızılDepartment of Otorhinolaryngology, Gazi University Hospital, Ankara, Turkey.
Utku AydilDepartment of Otorhinolaryngology, Gazi University Hospital, Ankara, Turkey.
Kadir Serdar DikerDepartment of Microbiology, Adnan Menderes University Faculty of Veterinary Medicine, Aydin, Turkey.
Süleyman Sabri UsluDepartment of Otorhinolaryngology, Gazi University Hospital, Ankara, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveMultiple inflammatory mechanisms dynamically interact in the development of chronic rhinosinusitis with nasal polyps (CRSwNP). Disruption of the relationship between host and environmental factors on the mucosal surface leads to the development of inflammation. Microorganisms constitute the most important part of environmental factors.

methods28 volunteers (18 CRSwNP patients and 10 healthy individuals) were included in the study. Eight patients were recurrent nasal polyposis cases, and the remaining were primary cases. Swab samples were taken from the middle meatus under endoscopic examination from all participants. After DNA extraction, a library was created with the Swift Amplicon 16S + ITS kit and sequenced with Illumina Miseq. Sequence analysis was performed using QIIME, UNITE v8.2 database for ITS and Silva v138 for 16S rRNA.

resultsThe predominant bacteria in all groups were Firmicutes, Proteobacteria, Actinobacteria as phyla and Staphylococcus, Corynebacterium, Sphingomonas as genera. Comparison of bacterial communities of CRSwNP patients and control group highlighted Corynebacterium, as the differentiating taxa for control group and Streptococcus, Moraxella, Rothia, Micrococcus, Gemella, and Prevotella for CRSwNP patients. The predominant fungal genus in all groups was Malassezia. Staphylococcus; showed a statistically significant negative correlation with Dolosigranulum. Corynebacterium had a positive correlation with Anaerococcus, and a negative correlation with Neisseria, Prevotella, Fusobacterium and Peptostreptococcus.

conclusionNasal microbiome of CRSwNP patients shows greater inter-individual variation than the control group. Corynebacterium is less abundant in patients with CRSwNP compared to the control group. Malassezia is the predominant fungus in the nasal cavity and paranasal sinuses and correlates positively with the abundance of Corynebacterium.

Indexed as

BacteriaNasal PolypsRhinitisSinusitisAdultCase-Control StudiesChronic DiseaseFemaleFungiHumansMaleMicrobiotaMiddle AgedRhinosinusitisRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID38820284
PMCPMC11142431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.