Evidence map›Paper›PMID 38817570›Full record

ArticleChemical science2024

Bioisostere-conjugated fluorescent probes for live-cell protein imaging without non-specific organelle accumulation.

Takuya Kamikawa, Akari Hashimoto, Nozomi Yamazaki, Junya Adachi, Ayami Matsushima, Kazuya Kikuchi, Yuichiro Hori

Abstract read
In one paragraph

Article in Chemical science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. A Noncovalent Fluorescent Probe for Dynamic Monitoring of Hemoglobin Accumulation in Living Cells.Luminescence : the journal of biological and chemical luminescence · 2026
    Article
  2. Experimental Approaches to Visualize Effector Protein Translocation During Host-Pathogen Interactions.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Takuya KamikawaGraduate School of Science, Kyushu University 744 Motooka Nishi Fukuoka 819-0395 Japan.ORCID https://orcid.org/0009-0007-8673-1339
Akari HashimotoGraduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan kkikuchi@mls.eng.osaka-u.ac.jp.
Nozomi YamazakiGraduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan kkikuchi@mls.eng.osaka-u.ac.jp.
Junya AdachiFaculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan hori@chem.kyushu-univ.jp.ORCID https://orcid.org/0000-0001-9479-5745
Ayami MatsushimaFaculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan hori@chem.kyushu-univ.jp.ORCID https://orcid.org/0000-0001-9751-577X
Kazuya KikuchiGraduate School of Engineering, Osaka University Suita Osaka 565-0871 Japan kkikuchi@mls.eng.osaka-u.ac.jp.ORCID https://orcid.org/0000-0001-7103-1275
Yuichiro HoriFaculty of Science, Kyushu University, Fukuoka Fukuoka 819-0395 Japan hori@chem.kyushu-univ.jp.ORCID https://orcid.org/0000-0002-2905-5502

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific labeling of proteins using membrane-permeable fluorescent probes is a powerful technique for bioimaging. Cationic fluorescent dyes with high fluorescence quantum yield, photostability, and water solubility provide highly useful scaffolds for protein-labeling probes. However, cationic probes generally show undesired accumulation in organelles, which causes a false-positive signal in localization analysis. Herein, we report a design strategy for probes that suppress undesired organelle accumulation using a bioisostere for intracellular protein imaging in living cells. Our design allows the protein labeling probes to possess both membrane permeability and suppress non-specific accumulation and has been shown to use several protein labeling systems, such as PYP-tag and Halo tag systems. We further developed a fluorogenic PYP-tag labeling probe for intracellular proteins and used it to visualize multiple localizations of target proteins in the intracellular system. Our strategy offers a versatile design for undesired accumulation-suppressed probes with cationic dye scaffolds and provides a valuable tool for intracellular protein imaging.

Identifiers

PMID38817570
PMCPMC11134342

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.