ArticleScientific data2024
Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA.
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Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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14citing papers in PubMed
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14 citing papers in PubMed.
- Metabarcoding Reveals Rich and Diverse Aeromycobiota in Protected Oak Forests.Microbial ecology · 2026Article
- Interconnected worlds: a comprehensive review of fungal defenses, antimicrobial resistance, and their evolutionary dynamics.IMA fungus · 2026Review
- Comparative Analysis of Fungal Spore Flora Among Birds, Insects and Air in a Temperate Japanese Forest.Ecology and evolution · 2026Article
- The biogeography of soil and airborne fungi in the Southwestern USA in relation to climate and vegetation.ISME communications · 2026Article
- Article
- Common to rare transfer learning (CORAL) enables inference and prediction for a quarter million rare Malagasy arthropods.Nature methods · 2025Article
- A Reference DNA Barcode Library for UK Fungi associated with Bark and Ambrosia Beetles.Scientific data · 2025Article
- Diversity of fungi attached to birds corresponds to the habitat ecologies of their avian dispersal vectors.Annals of botany · 2025Article
- Sequencing airborne DNA to monitor crop pathogens and pests.iScience · 2025Article
- From air to insight: the evolution of airborne DNA sequencing technologies.Microbiology (Reading, England) · 2025Review
- A curated soil fungal dataset to advance fungal ecology and conservation research in Australia and Antarctica.Scientific data · 2025Article
- Optimizing a modified cetyltrimethylammonium bromide protocol for fungal DNA extraction: Insights from multilocus gene amplification.Open life sciences · 2025Article
- Article
- Global Spore Sampling Project: A global, standardized dataset of airborne fungal DNA.Scientific data · 2024Article
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Authors and funding
112 authors.
Otso OvaskainenDepartment of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Jyväskylä, Finland. otso.t.ovaskainen@jyu.fi.ORCID 0000-0001-9750-4421
Nerea AbregoDepartment of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Jyväskylä, Finland.ORCID 0000-0001-6347-6127
Brendan FurneauxDepartment of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Jyväskylä, Finland.ORCID 0000-0003-3522-7363
Bess HardwickDepartment of Agricultural Sciences, University of Helsinki, P.O. Box 27, FI-00014, Helsinki, Finland.
Panu SomervuoOrganismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, P. O. Box 65, 00014, Helsinki, Finland.
Isabella PalorinneDepartment of Agricultural Sciences, University of Helsinki, P.O. Box 27, FI-00014, Helsinki, Finland.
Nigel R AndrewNatural History Museum, Zoology, University of New England, Armidale, NSW, 2351, Australia.ORCID 0000-0002-2850-2307
Ulyana V BabiyWrangel Island State Nature Reserve, Pevek, Russia.
Tan BaoDepartment of Biological Sciences, MacEwan University, 10, 700 - 104 Avenue, Edmonton, AB, T5J 2P2, Canada.
Gisela BazzanoUniversidad Nacional de Còrdoba, Facultad de Ciencias Exactas Físicas y Naturales, Centro de Zoología Aplicada, Córdoba, Argentina.
Svetlana N BondarchukSikhote-Alin State Nature Biosphere Reserve named after K. G. Abramov, 44 Partizanskaya Str., Terney, Primorsky krai, 692150, Russia.ORCID 0000-0002-3641-5203
Timothy C BonebrakeSchool of Biological Sciences, The University of Hong Kong, Hong Kong SAR, China.
Georgina L BrennanCSIC, Institute of Marine Sciences, Passeig Marítim de la Barceloneta, 37-49ES08003, Barcelona, Spain.
Syndonia Bret-HarteInstitute of Arctic Biology, University of Alaska, Fairbanks, AK, USA.
Claus BässlerGoethe-University Frankfurt, Faculty of Biological Sciences, Institute for Ecology, Evolution and Diversity, Conservation Biology, D- 60438, Frankfurt am Main, Germany.
Luciano CagnoloConsejo de Investigaciones Científicas y Técnicas (CONICET), Instituto Multidisciplinario de Biología Vegetal, Córdoba, Argentina.
Erin K CameronDepartment of Environmental Science, Saint Mary's University, 923 Robie St., Halifax, NS, B3H 3C3, Canada.
Elodie ChapurlatDepartment of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden.
Simon CreerMolecular Ecology and Evolution at Bangor (MEEB), School of Environmental and Natural Sciences, Bangor University, Environment Centre Wales, Deiniol Road, Bangor, Gwynedd, Wales, LL57 2UW, UK.ORCID 0000-0003-3124-3550
Luigi P D'AcquiResearch Institute on Terrestrial Ecosystems - IRET, National Research Council - CNR, Via Madonna del Piano n° 10, 50019, Sesto Fiorentino, Firenze, Italy.ORCID 0000-0003-2387-2488
Natasha de VereNatural History Museum of Denmark, University of Copenhagen, Gothersgade 130, 1123, København K, Denmark.ORCID 0000-0001-9593-6925
Marie-Laure Desprez-LoustauINRAE, BIOGECO, F-33610, Cestas, France.
Michel A K DongmoSchool of Biological Sciences, The University of Hong Kong, Hong Kong SAR, China.ORCID 0000-0002-0509-5227
Ida B Dyrholm JacobsenGreenland Institute of Natural Resources, Kivioq 2, P.O. Box 570, 3900, Nuuk, Greenland.ORCID 0000-0003-2481-8061
Brian L FisherEntomology, 55 Music Concourse Drive, California Academy of Sciences, San Francisco, CA, 94118, USA.ORCID 0000-0002-4653-3270
Miguel Flores de JesusLegado das Águas, Reserva Votorantin, TPR 188 Km 22, Tapiraí, SP, 18180-000, Brazil.
Gregory S GilbertEnvironmental Studies Department, University of California, Santa Cruz, 1156 High St., Santa Cruz, CA, 95065, USA.ORCID 0000-0002-5195-9903
Gareth W GriffithDepartment of Life Sciences, Aberystwyth University, Aberystwyth, Ceredigion, WALES SY23 3DD, UK.
Anna A GritsukSikhote-Alin State Nature Biosphere Reserve named after K. G. Abramov, 44 Partizanskaya Str., Terney, Primorsky krai, 692150, Russia.
Andrin GrossResearch Unit Biodiversity and Conservation Biology, SwissFungi, Swiss Federal Research Institute WSL, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland.
Håkan GruddSwedish Polar Research Secretariat, Abisko Scientific Research Station, Vetenskapens väg 38, SE-981 07, Abisko, Sweden.
Panu HalmeDepartment of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Jyväskylä, Finland.
Rachid HannaCenter for Tropical Research, Congo Basin Institute, University of California, Los Angeles (UCLA), Los Angeles, CA, 90095, USA.
Jannik HansenDepartment of Ecoscience, Aarhus University, Dk-4000, Roskilde, Denmark.
Lars Holst HansenDepartment of Ecoscience, Aarhus University, Dk-4000, Roskilde, Denmark.
Apollon D M T HegbeResearch Unit in Tropical Mycology and Plant-Soil Fungi Interactions, Faculty of Agronomy, University of Parakou, BP 123, Parakou, Republic of Benin.ORCID 0000-0003-0635-3459
Sarah HillNatural History Museum, Zoology, University of New England, Armidale, NSW, 2351, Australia.
Ian D HoggCanadian High Arctic Research Station, Polar Knowledge Canada, PO Box 2150, 1 Uvajuq Road, Cambridge Bay, Nunavut, X0B 0C0, Canada.
Jenni HultmanDepartment of Microbiology, University of Helsinki, Viikinkaari 9, FI-00014, Helsinki, Finland.ORCID 0000-0002-3431-1785
Kevin D HydeCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.
Nicole A HynsonPacific Biosciences Research Center, University of Hawaii at Manoa, Honolulu, HI, USA.ORCID 0000-0001-7098-9641
Natalia IvanovaCentre for Biodiversity Genomics, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Petteri KaristoPlant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.ORCID 0000-0003-4807-0190
Deirdre KerdraonDepartment of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden.
Anastasia KnorreScience Department, National Park Krasnoyarsk Stolby, 26a Kariernaya str., 660006, Krasnoyarsk, Russia.
Irmgard Krisai-GreilhuberDepartment of Botany and Biodiversity Research, University of Vienna, Rennweg 14, 1030, Wien, Austria.
Juri KurhinenOrganismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, P. O. Box 65, 00014, Helsinki, Finland.
Masha KuzminaCentre for Biodiversity Genomics, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Nicolas LecomteCentre d'études nordiques and Canada Research Chair in Polar and Boreal Ecology, Department of Biology, Pavillon Rémi-Rossignol, 18, Antonine-Maillet, Université de Moncton, Moncton, NB, E1A 3E9, Canada.
Erin LecomteCentre d'études nordiques and Canada Research Chair in Polar and Boreal Ecology, Department of Biology, Pavillon Rémi-Rossignol, 18, Antonine-Maillet, Université de Moncton, Moncton, NB, E1A 3E9, Canada.ORCID 0009-0005-1440-2056
Viviana LoaizaDepartment of Evolutionary Biology and Environmental Sciences, University of Zürich, Zürich, Switzerland.
Erik LundinSwedish Polar Research Secretariat, Abisko Scientific Research Station, Vetenskapens väg 38, SE-981 07, Abisko, Sweden.
Alexander MeireSwedish Polar Research Secretariat, Abisko Scientific Research Station, Vetenskapens väg 38, SE-981 07, Abisko, Sweden.
Armin MešićLaboratory for Biological Diversity, Rudjer Boskovic Institute, Bijenicka cesta 54, HR-10000, Zagreb, Croatia.ORCID 0000-0002-4479-600X
Otto MiettinenFinnish Museum of Natural History, University of Helsinki, P.O. Box 7, 00014, Helsinki, Finland.ORCID 0000-0001-7502-710X
Norman MonkhauseCentre for Biodiversity Genomics, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Peter MortimerCentre for Mountain Futures, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China.
Jörg MüllerField Station Fabrikschleichach, Department of Animal Ecology and Tropical Biology (Zoology III), Julius Maximilians University Würzburg, Rauhenebrach, Germany.
R Henrik NilssonDepartment of Biological and Environmental Sciences, Gothenburg Global Biodiversity Centre, University of Gothenburg, Box 461, 405 30, Göteborg, Sweden.ORCID 0000-0002-8052-0107
Puani Yannick C NontiResearch Unit in Tropical Mycology and Plant-Soil Fungi Interactions, Faculty of Agronomy, University of Parakou, BP 123, Parakou, Republic of Benin.
Jenni NordénNorwegian Institute for Nature Research (NINA), Sognsveien 68, N-0855, Oslo, Norway.
Björn NordénNorwegian Institute for Nature Research (NINA), Sognsveien 68, N-0855, Oslo, Norway.ORCID 0000-0002-2739-9774
Claudia PazDepartment of Biodiversity, Institute of Biosciences, São Paulo State University, Av 24A 1515, Rio Claro, SP, 13506-900, Brazil.
Petri PellikkaDepartment of Geosciences and Geography, Faculty of Science, University of Helsinki, P.O. Box 64, 00014, Helsinki, Finland.
Danilo PereiraPlant Pathology Group, Institute of Integrative Biology, ETH Zurich, Zurich, Switzerland.
Geoff PetchSchool of Science and the Environment, University of Worcester, Henwick Grove, Worcester, WR2 6AJ, UK.
Juha-Matti PitkänenNatural Resources Institute Finland, Latokartanonkaari 9, 00790, Helsinki, Finland.
Flavius PopaDepartment of Ecosystem Monitoring, Research & Conservation, Black Forest National Park, Kniebisstraße 67, 77740, Bad Peterstal-Griesbach, Germany.
Caitlin PotterDepartment of Life Sciences, Aberystwyth University, Aberystwyth, Ceredigion, WALES SY23 3DD, UK.
Jenna PurhonenDepartment of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Jyväskylä, Finland.ORCID 0000-0002-1306-4623
Sanna PätsiThe Biodiversity Unit of the University of Turku, Henrikinkatu 2, 20500, Turku, Finland.
Abdullah RafiqMolecular Ecology and Evolution at Bangor (MEEB), School of Environmental and Natural Sciences, Bangor University, Environment Centre Wales, Deiniol Road, Bangor, Gwynedd, Wales, LL57 2UW, UK.
Dimby RaharinjanaharyMadagascar Biodiversity Center, Parc Botanique et Zoologique de Tsimbazaza, Antananarivo, 101, Madagascar.
Niklas RakosSwedish Polar Research Secretariat, Abisko Scientific Research Station, Vetenskapens väg 38, SE-981 07, Abisko, Sweden.ORCID 0000-0002-5268-5799
Achala R RathnayakaCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.ORCID 0000-0001-8498-2715
Katrine RaundrupGreenland Institute of Natural Resources, Kivioq 2, P.O. Box 570, 3900, Nuuk, Greenland.
Yury A RebrievSouthern Scientific Center of the Russian Academy of Sciences, 41 Chekhov ave., Rostov-on-Don, 344006, Russia.ORCID 0000-0001-5156-8593
Jouko RikkinenOrganismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, P. O. Box 65, 00014, Helsinki, Finland.
Hanna M K RogersDepartment of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden.
Andrey RogovskyScience Department, National Park Krasnoyarsk Stolby, 26a Kariernaya str., 660006, Krasnoyarsk, Russia.
Yuri RozhkovState Nature Reserve Olekminsky, Olekminsk, Russian Federation, Russia.
Kadri RunnelMycology and Microbiology Center, University of Tartu, Tartu, Estonia.ORCID 0000-0002-7308-3623
Annika SaartoThe Biodiversity Unit of the University of Turku, Henrikinkatu 2, 20500, Turku, Finland.
Anton SavchenkoInstitute of Ecology and Earth Sciences, University of Tartu, Liivi 2, 50409, Tartu, Estonia.
Markus SchlegelResearch Unit Biodiversity and Conservation Biology, SwissFungi, Swiss Federal Research Institute WSL, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland.
Niels Martin SchmidtDepartment of Ecoscience, Aarhus University, Dk-4000, Roskilde, Denmark.ORCID 0000-0002-4166-6218
Sebastian SeiboldTUD Dresden University of Technology, Forest Zoology, Pienner Str. 7, 01737, Tharandt, Germany.
Carsten SkjøthSchool of Science and the Environment, University of Worcester, Henwick Grove, Worcester, WR2 6AJ, UK.ORCID 0000-0001-5992-9568
Elisa StengelField Station Fabrikschleichach, Department of Animal Ecology and Tropical Biology (Zoology III), Julius Maximilians University Würzburg, Rauhenebrach, Germany.
Svetlana V SutyrinaSikhote-Alin State Nature Biosphere Reserve named after K. G. Abramov, 44 Partizanskaya Str., Terney, Primorsky krai, 692150, Russia.
Ilkka SyvänperäThe Biodiversity Unit of the University of Turku, Kevontie 470, 99980, Utsjoki, Finland.
Leho TedersooMycology and Microbiology Center, University of Tartu, Tartu, Estonia.ORCID 0000-0002-1635-1249
Jebidiah TimmInstitute of Arctic Biology, University of Alaska, Fairbanks, AK, USA.
Laura TiptonSchool of Natural Science and Mathematics, Chaminade University of Honolulu, Honolulu, HI, USA.ORCID 0000-0002-5118-2671
Hirokazu TojuLaboratory of Ecosystems and Coevolution, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8501, Japan.ORCID 0000-0002-3362-3285
Maria Uscka-PerzanowskaDepartment of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden.
Michelle van der BankAfrican Centre for DNA Barcoding (ACDB), University of Johannesburg, PO BOX 524, Auckland Park, 2006, South Africa.
F Herman van der BankAfrican Centre for DNA Barcoding (ACDB), University of Johannesburg, PO BOX 524, Auckland Park, 2006, South Africa.
Bryan VandenbrinkCanadian High Arctic Research Station, Polar Knowledge Canada, PO Box 2150, 1 Uvajuq Road, Cambridge Bay, Nunavut, X0B 0C0, Canada.ORCID 0000-0002-8234-8195
Stefano VenturaResearch Institute on Terrestrial Ecosystems - IRET, National Research Council - CNR, Via Madonna del Piano n° 10, 50019, Sesto Fiorentino, Firenze, Italy.ORCID 0000-0002-8134-3675
Solvi R VignissonSudurnes Science and Learning Center, Garðvegi 1, 245, Sandgerði, Iceland.
Xiaoyang WangState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Wolfgang W WeisserTechnical University of Munich, Terrestrial Ecology Research Group, Department of Life Science Systems, School of Life Sciences, Hans-Carl-von-Carlowitz-Platz 2, 85354, Freising, Germany.ORCID 0000-0002-2757-8959
Subodini N WijesingheCenter of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand.ORCID 0000-0002-5625-9578
S Joseph WrightSmithsonian Tropical Research Institute, Apartado, 0843-03092, Balboa, Panama.ORCID 0000-0003-4260-5676
Chunyan YangState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.
Nourou S YorouResearch Unit in Tropical Mycology and Plant-Soil Fungi Interactions, Faculty of Agronomy, University of Parakou, BP 123, Parakou, Republic of Benin.ORCID 0000-0001-6997-811X
Amanda YoungInstitute of Arctic Biology, University of Alaska, Fairbanks, AK, USA.
Douglas W YuState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, China.ORCID 0000-0001-8551-5609
Evgeny V ZakharovCentre for Biodiversity Genomics, University of Guelph, Guelph, ON, N1G 2W1, Canada.
Paul D N HebertCanadian High Arctic Research Station, Polar Knowledge Canada, PO Box 2150, 1 Uvajuq Road, Cambridge Bay, Nunavut, X0B 0C0, Canada.
Tomas RoslinOrganismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, P. O. Box 65, 00014, Helsinki, Finland.ORCID 0000-0002-2957-4791
Funding
Academy of Finland (Suomen Akatemia) 336212, 345110EC | EC Seventh Framework Programm | FP7 Ideas: European Research Council (FP7-IDEAS-ERC - Specific Programme: "Ideas" Implementing the Seventh Framework Programme of the European Community for Research, Technological Development and Demonstration Activities (2007 to 2013)) 856506
Abstract
Novel methods for sampling and characterizing biodiversity hold great promise for re-evaluating patterns of life across the planet. The sampling of airborne spores with a cyclone sampler, and the sequencing of their DNA, have been suggested as an efficient and well-calibrated tool for surveying fungal diversity across various environments. Here we present data originating from the Global Spore Sampling Project, comprising 2,768 samples collected during two years at 47 outdoor locations across the world. Each sample represents fungal DNA extracted from 24 m
Indexed as
Air MicrobiologyDNA, FungalSpores, FungalBiodiversityFungiDNA, Fungal
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