Evidence map›Paper›PMID 38815868›Full record

ArticleThe Journal of biological chemistry2024

Klebsiella pneumoniae O-polysaccharide biosynthesis highlights the diverse organization of catalytic modules in ABC transporter-dependent glycan assembly.

Steven D Kelly, Danielle M Williams, Shawna Zhu, Taeok Kim, Manas Jana, Jeremy Nothof, V Narasimharao Thota, Todd L Lowary, Chris Whitfield

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. O-antigen polysaccharides inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Steven D KellyDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
Danielle M WilliamsDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
Shawna ZhuDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada.
Taeok KimDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Manas JanaDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Jeremy NothofDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
V Narasimharao ThotaDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada.
Todd L LowaryDepartment of Chemistry, University of Alberta, Edmonton, Alberta, Canada; Institute of Biological Chemistry, Academia Sinica, Taipei, Taiwan; Institute of Biochemical Sciences, National Taiwan University, Taipei, Taiwan. Electronic address: toddlowary.sinica@gmail.com.
Chris WhitfieldDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, Ontario, Canada. Electronic address: cwhitfie@uoguelph.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Klebsiella pneumoniae provides influential prototypes for lipopolysaccharide O antigen (OPS) biosynthesis in Gram-negative bacteria. Sequences of OPS-biosynthesis gene clusters in serotypes O4 and O7 suggest fundamental differences in the organization of required enzyme modules compared to other serotypes. Furthermore, some required activities were not assigned by homology shared with characterized enzymes. The goal of this study was therefore to resolve the serotype O4 and O7 pathways to expand our broader understanding of glycan polymerization and chain termination processes. The O4 and O7 antigens were produced from cloned genetic loci in recombinant Escherichia coli. Systematic in vivo and in vitro approaches were then applied to assign each enzyme in each of the pathways, defining the necessary components for polymerization and chain termination. OPS assembly is accomplished by multiprotein complexes formed by interactions between polymerase components variably distributed in single and multimodule proteins. In each complex, a terminator function is present in a protein containing a characteristic coiled-coil molecular ruler, which determines glycan chain length. In serotype O4, we discovered a CMP-α-3-deoxy-ᴅ-manno-octulosonic acid-dependent chain-terminating glycosyltransferase that is the founding member of a new glycosyltransferase family (GT137) and potentially identifies a new glycosyltransferase fold. The O7 OPS is terminated by a methylphosphate moiety, like the K. pneumoniae O3 antigen, but the methyltransferase-kinase enzyme pairs responsible for termination in these serotypes differ in sequence and predicted structures. Together, the characterization of O4 and O7 has established unique enzyme activities and provided new insight into glycan-assembly strategies that are widely distributed in bacteria.

Indexed as

Bacterial ProteinsKlebsiella pneumoniaeO AntigensATP-Binding Cassette TransportersEscherichia coliMultigene FamilyATP-Binding Cassette TransportersBacterial ProteinsO Antigensin vitroKlebsiellaO4O7O-antigenspolymerizationpolysaccharidetermination

Identifiers

PMID38815868
PMCPMC11231755

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.