Evidence map›Paper›PMID 38815188›Full record

ArticleJCO clinical cancer informatics2024

Extracting Electronic Health Record Neuroblastoma Treatment Data With High Fidelity Using the REDCap Clinical Data Interoperability Services Module.

Brian Furner, Alex Cheng, Ami V Desai, Daniel J Benedetti, Debra L Friedman, Kirk D Wyatt, Michael Watkins, Samuel L Volchenboum, Susan L Cohn

Registry-linked trialAbstract read
In one paragraph

Article in JCO clinical cancer informatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00904241 (Neuroblastoma Biology Studies), which is not on this map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00904241 completednot on this map

Neuroblastoma Biology Studies

TypeobservationalSponsorChildren's Oncology GroupRan2000 to 2026Enrolled10,000ConditionsGanglioneuroblastoma, Localized Resectable Neuroblastoma, Localized Unresectable Neuroblastoma, Regional NeuroblastomaArmsCytology Specimen Collection Procedure, Laboratory Biomarker Analysis
3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Brian FurnerDepartment of Pediatrics, Section of Hematology/Oncology, The University of Chicago, Chicago, IL.ORCID 0000-0001-7074-7247
Alex ChengDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0002-1787-691X
Ami V DesaiDepartment of Pediatrics, Section of Hematology/Oncology, The University of Chicago, Chicago, IL.ORCID 0000-0001-9658-3156
Daniel J BenedettiDepartment of Pediatrics, Division of Hematology/Oncology, Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-1524-3518
Debra L FriedmanDepartment of Pediatrics, Division of Hematology/Oncology, Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0001-5733-5088
Kirk D WyattDepartment of Pediatric Hematology/Oncology, Roger Maris Cancer Center, Sanford Health, Fargo, ND.ORCID 0000-0002-3856-2055
Michael WatkinsDepartment of Pediatrics, Section of Hematology/Oncology, The University of Chicago, Chicago, IL.ORCID 0000-0003-0613-1127
Samuel L VolchenboumDepartment of Pediatrics, Section of Hematology/Oncology, The University of Chicago, Chicago, IL.ORCID 0000-0001-9863-851X
Susan L CohnDepartment of Pediatrics, Section of Hematology/Oncology, The University of Chicago, Chicago, IL.ORCID 0000-0001-5749-7650

Funding

The Institute for Translational MedicineUL1TR002389 · NCATS · UNIVERSITY OF CHICAGO · PI Joshua J Jacobs, DAVID O MELTZER · 2017 to 2026
$71.6M
NCATS NIH HHS UL1 TR002389
6 · The paper itself

Abstract

purposeAlthough the International Neuroblastoma Risk Group Data Commons (INRGdc) has enabled seminal large cohort studies, the research is limited by the lack of real-world, electronic health record (EHR) treatment data. To address this limitation, we evaluated the feasibility of extracting treatment data directly from EHRs using the REDCap Clinical Data Interoperability Services (CDIS) module for future submission to the INRGdc.

methodsPatients enrolled on the Children's Oncology Group neuroblastoma biology study ANBL00B1 (ClinicalTrials.gov identifier: NCT00904241) who received care at the University of Chicago (UChicago) or the Vanderbilt University Medical Center (VUMC) after the go-live dates for the Fast Healthcare Interoperability Resources (FHIR)-compliant EHRs were identified. Antineoplastic drug orders were extracted using the CDIS module. To validate the CDIS output, antineoplastic agents extracted through FHIR were compared with those queried through EHR relational databases (UChicago's Clinical Research Data Warehouse and VUMC's Epic Clarity database) and manual chart review.

resultsThe analytic cohort consisted of 41 patients at UChicago and 32 VUMC patients. Antineoplastic drug orders were identified in the extracted EHR records of 39 (95.1%) UChicago patients and 26 (81.3%) VUMC patients. Manual chart review confirmed that patients with missing (n = 8) or discontinued (n = 1) orders in the CDIS output did not receive antineoplastic agents during the timeframe of the study. More than 99% of the antineoplastic drug orders in the EHR relational databases were identified in the corresponding CDIS output.

conclusionOur results demonstrate the feasibility of extracting EHR treatment data with high fidelity using HL7-FHIR via REDCap CDIS for future submission to the INRGdc.

Indexed as

Electronic Health RecordsNeuroblastomaAntineoplastic AgentsChildChild, PreschoolDatabases, FactualFemaleHealth Information InteroperabilityHumansInfantMaleAntineoplastic Agents

Identifiers

PMID38815188
PMCPMC11371086

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.