Evidence map›Paper›PMID 38815170›Full record

ArticleACS nano2024

Quantum Dot-Fab' Conjugates as Compact Immunolabels for Microtubule Imaging and Cell Classification.

Vladimir L Kolossov, Kaviamuthan Kanakaraju, Suresh Sarkar, Opeyemi H Arogundade, Chia-Wei Kuo, Nihar R Mara, Andrew M Smith

Abstract read
In one paragraph

Article in ACS nano, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Bandgap-Engineered PtAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  2. Article
  3. Article
  4. Methods for Conjugating Antibodies with Quantum Dots.Molecules (Basel, Switzerland) · 2025
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Vladimir L KolossovDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.
Kaviamuthan KanakarajuDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.
Suresh SarkarDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.
Opeyemi H ArogundadeDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.
Chia-Wei KuoDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.ORCID 0000-0002-3254-2037
Nihar R MaraDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.
Andrew M SmithDepartment of Bioengineering, University of Illinois Urbana-Champaign, Urbana, Illinois 61801, United States.ORCID 0000-0002-0238-4816

Funding

Super-Resolution Microscopy of Small Quantum Dots to Elucidate the Mechanisms of Alzheimer's DiseaseR01NS097610 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHUNG, HEE JUNG, SELVIN, PAUL R · 2016 to 2020
$3.3M
Super-Resolution Microscopy of Neuronal Synapses with Small Quantum Dots and Advanced Imaging ToolsR01NS100019 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHUNG, HEE JUNG, SELVIN, PAUL R · 2017 to 2025
$3.2M
Hyperplexed Quantum Dots for Multidimensional Cell Classification in Intact TissueR01EB032249 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI SMITH, ANDREW MICHAEL · 2021 to 2024
$2.3M
Digital Multiplexed Analysis of Circulating Nucleic Acids in Small-Volume Blood SpecimensR01EB032725 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KOHLI, MANISH, SMITH, ANDREW MICHAEL · 2022 to 2025
$2.2M
Tissue microenvironment (TIMe) training programT32EB019944 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BHARGAVA, ROHIT, GASKINS, REX · 2016 to 2025
$1.9M
Daily Quantification of Cancer-Associated Exosomal miRNA in Patient Blood by Photonic Crystal-Enhanced Quantum Dot EmissionR01CA227699 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KOHLI, MANISH, SMITH, ANDREW MICHAEL · 2018 to 2022
$1.8M
Advanced Molecular Probes and Cell Engineering Tools for Accurate Single-Molecule Analysis of Signaling in Individual CellsR01GM131272 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI SMITH, ANDREW MICHAEL · 2019 to 2022
$1.1M
NCI NIH HHS R01 CA227699NIBIB NIH HHS R01 EB032249NIBIB NIH HHS R01 EB032725NIBIB NIH HHS T32 EB019944NIGMS NIH HHS R01 GM131272NINDS NIH HHS R01 NS097610NINDS NIH HHS R01 NS100019
6 · The paper itself

Abstract

Antibodies and their conjugates of fluorescent labels are widely applied in life sciences research and clinical pathology. Among diverse label types, compact quantum dots (QDs) provide advantages of multispectral multiplexing, bright signals in the deep red and infrared, and low steric hindrance. However, QD-antibody conjugates have random orientation of the antigen-binding domain which may interfere with labeling and are large (20-30 nm) and heterogeneous, which limits penetration into biospecimens. Here, we develop conjugates of compact QDs and Fab' antibody fragments as primary immunolabels. Fab' fragments are conjugated site-specifically through sulfhydryl groups distal to antigen-binding domains, and the multivalent conjugates have small and homogeneous sizes (∼12 nm) near those of full-sized antibodies. Their performance as immunolabels for intracellular antigens is evaluated quantitatively by metrics of microtubule labeling density and connectivity in fixed cells and for cytological identification in fixed brain specimens, comparing results with probes based on spectrally-matched dyes. QD-Fab' conjugates outperformed QD conjugates of full-sized antibodies and could be imaged with bright signals with 1-photon and 2-photon excitation. The results demonstrate a requirement for smaller bioaffinity agents and site-specific orientation for the success of nanomaterial-based labels to enhance penetration in biospecimens and minimize nonspecific staining.

Indexed as

Immunoglobulin Fab FragmentsMicrotubulesQuantum DotsAnimalsFluorescent DyesHumansMiceFluorescent DyesImmunoglobulin Fab Fragmentscytoskeletonimmunofluorescencenanocrystalneuronneurosciencespatial proteomics

Identifiers

PMID38815170
PMCPMC11262708

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.