Evidence map›Paper›PMID 38814988›Full record

ArticlePLoS pathogens2024

OTUB1 contributes to the stability and function of Influenza A virus NS2.

Yu-Jyun Li, Chi-Yuan Chen, Yu-Shen Kuo, Yi-Wen Huang, Rei-Lin Kuo, Li-Kwan Chang, Jeng-How Yang, Chih-Ho Lai, Shin-Ru Shih, Ya-Fang Chiu

Abstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yu-Jyun LiDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.
Chi-Yuan ChenDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.
Yu-Shen KuoDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.
Yi-Wen HuangDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.
Rei-Lin KuoResearch Center for Emerging Viral Infections, Chang Gung University, Taoyuan, Taiwan.
Li-Kwan ChangDepartment of Biochemical Science and Technology, College of Life Science, National Taiwan University, Taipei, Taiwan.
Jeng-How YangDivision of Infectious Diseases, Department of Medicine, Chang Gung Memorial Hospital, New Taipei, Taiwan.
Chih-Ho LaiDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.
Shin-Ru ShihResearch Center for Emerging Viral Infections, Chang Gung University, Taoyuan, Taiwan.
Ya-Fang ChiuDepartment of Microbiology and Immunology, Chang Gung University, Taoyuan, Taiwan.ORCID 0000-0002-7506-9032

Funding

National Science and Technology Council, NSTC 109-2320-B-182-028-MY3National Science and Technology Council, NSTC NSTC 112-2320-B-182-033
6 · The paper itself

Abstract

The influenza A virus (IAV) consists of 8 single-stranded, negative-sense viral RNA (vRNA) segments. After infection, vRNA is transcribed, replicated, and wrapped by viral nucleoprotein (NP) to form viral ribonucleoprotein (vRNP). The transcription, replication, and nuclear export of the viral genome are regulated by the IAV protein, NS2, which is translated from spliced mRNA transcribed from viral NS vRNA. This splicing is inefficient, explaining why NS2 is present in low abundance after IAV infection. The levels of NS2 and its subsequent accumulation are thought to influence viral RNA replication and vRNP nuclear export. Here we show that NS2 is ubiquitinated at the K64 and K88 residues by K48-linked and K63-linked polyubiquitin (polyUb) chains, leading to the degradation of NS2 by the proteasome. Additionally, we show that a host deubiquitinase, OTUB1, can remove polyUb chains conjugated to NS2, thereby stabilizing NS2. Accordingly, knock down of OTUB1 by siRNA reduces the nuclear export of vRNP, and reduces the overall production of IAV. These results collectively demonstrate that the levels of NS2 in IAV-infected cells are regulated by a ubiquitination-deubiquitination system involving OTUB1 that is necessary for optimal IAV replication.

Indexed as

Cysteine EndopeptidasesInfluenza A virusViral Nonstructural ProteinsVirus ReplicationAnimalsCell LineChlorocebus aethiopsDeubiquitinating EnzymesDogsHEK293 CellsHumansInfluenza, HumanRNA, ViralUbiquitinationVero CellsCysteine EndopeptidasesDeubiquitinating EnzymesNS2 protein, influenza virus AOTUB1 protein, humanRNA, ViralViral Nonstructural Proteins

Identifiers

PMID38814988
PMCPMC11166342

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.