Evidence map›Paper›PMID 38811828›Full record

ArticleScientific reports2024

Characterization of an endoplasmic reticulum stress-associated lncRNA prognostic signature and the tumor-suppressive role of RP11-295G20.2 knockdown in lung adenocarcinoma.

Liying Yu, Shuang Zhou, Wencong Hong, Na Lin, Qingshui Wang, Pingping Liang

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Liying YuCentral Laboratory, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, 362000, China. yly20070567@126.com.
Shuang ZhouSecond Affiliated Hospital of Fujian Medical University, Quanzhou, 362000, China.
Wencong HongSecond Affiliated Hospital of Fujian Medical University, Quanzhou, 362000, China.
Na LinPathology Department, The Second Affiliated Hospital of Fujian Medical University, Quanzhou, 362000, China.
Qingshui WangFujian-Macao Science and Technology Cooperation Base of Traditional Chinese Medicine-Oriented Chronic Disease Prevention and Treatment, Innovation and Transformation Center, Fujian University of Traditional Chinese Medicine, Fuzhou, 350001, China. wangqingshui@fjtcm.edu.cn.
Pingping LiangCenter for Infection and Immunity, Guangdong Provincial Engineering Research Center of Molecular Imaging, The Fifth Affiliated Hospital of Sun Yat-sen University, Zhuhai, 519000, China. lppleiyu@163.com.

Funding

doctoral research project of the Second Affiliated Hospital of Fujian Medical University BS202203Sixth Batch of Quanzhou High-Level Talent Team Projects 2023CT014
6 · The paper itself

Abstract

Endoplasmic reticulum stress (ERS) is commonly induced by accumulating misfolded or unfolded proteins in tumor microenvironment. Long non-coding RNAs (lncRNAs) play important roles in ERS response and lung adenocarcinoma (LUAD) progression. However, the role of ERS-related lncRNAs in LUAD remains unknown. In this study, we aimed to identify ERS-associated lncRNAs with prognostic value in LUAD and characterize their clinical implications. Cox and least absolute shrinkage and selection operator regression analyses identified nine ERS-related lncRNAs with independent prognostic abilities, including five protective factors (CROCCP2, KIAA0125, LINC0996, RPARP-AS1 and TBX5-AS1) and four risk factors (LINC0857, LINC116, RP11-21L23.2 and RP11-295G20.2). We developed an ERS-related lncRNA risk prediction model in predicting overall survival of LUAD patients, which classified TCGA cohorts into high-risk (HS) and low-risk (LS) groups. Comprehensive bioinformatic analyses revealed HS patients featured with late-stage tumors, greater mutation burdens, weaker anti-tumor immunity/responses, and lower sensitivity to targeted drugs compared to LS patients, contributing to tumor progression and a poor prognosis. Functional enrichment analysis implicated these ERS-related lncRNAs in cell migration, cell death, and immunity. Furthermore, expression of the most significantly upregulated risk lncRNA, RP11-295G20.2, was validated at the mRNA level using clinical LUAD samples. Knockdown of RP11-295G20.2 obviously reduced ERS and suppressed proliferation, invasion, and migration of LUAD cells. This novel ERS-related lncRNA signature provides a new biomarker for prognostic prediction, and ERS-associated RP11-295G20.2 serves as a potential therapeutic target in LUAD.

Indexed as

Adenocarcinoma of LungEndoplasmic Reticulum StressGene Expression Regulation, NeoplasticLung NeoplasmsRNA, Long NoncodingBiomarkers, TumorCell Line, TumorCell MovementCell ProliferationFemaleGene Knockdown TechniquesHumansMaleMiddle AgedPrognosisBiomarkers, TumorRNA, Long NoncodingEndoplasmic reticulum stressImmunitylncRNALung adenocarcinomaPrognosisRP11-295G20.2

Identifiers

PMID38811828
PMCPMC11137026

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.