Evidence map›Paper›PMID 38811748›Full record

ArticleCommunications biology2024

Transgene removal using an in cis programmed homing endonuclease via single-strand annealing in the mosquito Aedes aegypti.

Keun Chae, Bryan Contreras, Joseph S Romanowski, Chanell Dawson, Kevin M Myles, Zach N Adelman

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Keun ChaeDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Bryan ContrerasDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Joseph S RomanowskiDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Chanell DawsonDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Kevin M MylesDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA.
Zach N AdelmanDepartment of Entomology, Texas A&M University, College Station, TX, 77843, USA. zachadel@tamu.edu.ORCID 0000-0001-5901-7171

Funding

Self-Eliminating Strategy To Control Gene DriveR01AI148787 · NIAID · TEXAS A&M AGRILIFE RESEARCH · PI Zach N. Adelman, KEVIN M MYLES · 2020 to 2026
$4.4M
DNA repair pathway choice and significance in targeted genome editing of Aedes aegyptiR01AI137112 · NIAID · TEXAS A&M AGRILIFE RESEARCH · PI ADELMAN, ZACH N. · 2018 to 2022
$2.1M
NIAID NIH HHS R01 AI137112NIAID NIH HHS R01 AI148787U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI137112U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI148787
6 · The paper itself

Abstract

While gene drive strategies have been proposed to aid in the control of mosquito-borne diseases, additional genome engineering technologies may be required to establish a defined end-of-product-life timeline. We previously demonstrated that single-strand annealing (SSA) was sufficient to program the scarless elimination of a transgene while restoring a disrupted gene in the disease vector mosquito Aedes aegypti. Here, we extend these findings by establishing that complete transgene removal (four gene cassettes comprising ~8-kb) can be programmed in cis. Reducing the length of the direct repeat from 700-bp to 200-bp reduces, but does not eliminate, SSA activity. In contrast, increasing direct repeat length to 1.5-kb does not increase SSA rates, suggesting diminishing returns above a certain threshold size. Finally, we show that while the homing endonuclease Y2-I-AniI triggered both SSA and NHEJ at significantly higher rates than I-SceI at one genomic locus (P5-EGFP), repair events are heavily skewed towards NHEJ at another locus (kmo), suggesting the nuclease used and the genomic region targeted have a substantial influence on repair outcomes. Taken together, this work establishes the feasibility of engineering temporary transgenes in disease vector mosquitoes, while providing critical details concerning important operational parameters.

Indexed as

AedesEndonucleasesTransgenesAnimalsAnimals, Genetically ModifiedMosquito VectorsEndonucleases

Identifiers

PMID38811748
PMCPMC11137009

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.