Evidence map›Paper›PMID 38810650›Full record

ArticleCell reports2024

Identification of protein aggregates in the aging vertebrate brain with prion-like and phase-separation properties.

Itamar Harel, Yiwen R Chen, Inbal Ziv, Param Priya Singh, Daniel Heinzer, Paloma Navarro Negredo, Uri Goshtchevsky, Wei Wang, Gwendoline Astre, Eitan Moses and 7 more

Abstract read
In one paragraph

Article in Cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
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  7. Molecular evolution of animal aging.The EMBO journal · 2026
    Review
  8. Article
  9. Review
  10. Genetic regulators of neuronal survival across metabolic environments.bioRxiv : the preprint server for biology · 2025
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Itamar HarelDepartment of Genetics, Stanford University, Stanford, CA 94305, USA; The Silberman Institute, the Hebrew University of Jerusalem, Givat Ram, Jerusalem 91904, Israel. Electronic address: itamarh@mail.huji.ac.il.
Yiwen R ChenDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Inbal ZivDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Param Priya SinghDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Daniel HeinzerDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Paloma Navarro NegredoDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Uri GoshtchevskyThe Silberman Institute, the Hebrew University of Jerusalem, Givat Ram, Jerusalem 91904, Israel.
Wei WangStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Gwendoline AstreThe Silberman Institute, the Hebrew University of Jerusalem, Givat Ram, Jerusalem 91904, Israel.
Eitan MosesThe Silberman Institute, the Hebrew University of Jerusalem, Givat Ram, Jerusalem 91904, Israel.
Andrew McKayDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Ben E MachadoDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Katja HebestreitDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
Sifei YinDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA.
Alejandro Sánchez AlvaradoStowers Institute for Medical Research, Kansas City, MO 64110, USA; Howard Hughes Medical Institute.
Daniel F JaroszDepartment of Chemical and Systems Biology, Stanford University, Stanford, CA 94305, USA; Department of Developmental Biology, Stanford University, Stanford, CA 94305, USA. Electronic address: jarosz@stanford.edu.
Anne BrunetDepartment of Genetics, Stanford University, Stanford, CA 94305, USA; Glenn Laboratories for the Biology of Aging, Stanford University, Stanford, CA 94305, USA. Electronic address: abrunet1@stanford.edu.

Funding

Translational Oncology Research Program (Project-005)P30CA124435 · NCI · STANFORD UNIVERSITY · PI MICHAEL KENNEY · 2007 to 2026
$71.4M
Brain-wide screen for a neural pacemaker of agingR01AG063418 · NIA · STANFORD UNIVERSITY · PI BRUNET, ANNE, DEISSEROTH, KARL A. · 2018 to 2022
$13.5M
Discovery of protein aggregates during vertebrate aging and neurodegenerationRF1AG057334 · NIA · STANFORD UNIVERSITY · PI BRUNET, ANNE, JAROSZ, DANIEL · 2017 to 2017
$3.7M
Transposable elements as drivers of normal and accelerated aging in VertebratesR21AG063739 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BENAYOUN, BERENICE ANATH · 2019 to 2020
$464k
NCI NIH HHS P30 CA124435NIA NIH HHS R01 AG063418NIA NIH HHS R21 AG063739NIA NIH HHS RF1 AG057334
6 · The paper itself

Abstract

Protein aggregation, which can sometimes spread in a prion-like manner, is a hallmark of neurodegenerative diseases. However, whether prion-like aggregates form during normal brain aging remains unknown. Here, we use quantitative proteomics in the African turquoise killifish to identify protein aggregates that accumulate in old vertebrate brains. These aggregates are enriched for prion-like RNA-binding proteins, notably the ATP-dependent RNA helicase DDX5. We validate that DDX5 forms aggregate-like puncta in the brains of old killifish and mice. Interestingly, DDX5's prion-like domain allows these aggregates to propagate across many generations in yeast. In vitro, DDX5 phase separates into condensates. Mutations that abolish DDX5 prion propagation also impair the protein's ability to phase separate. DDX5 condensates exhibit enhanced enzymatic activity, but they can mature into inactive, solid aggregates. Our findings suggest that protein aggregates with prion-like properties form during normal brain aging, which could have implications for the age-dependency of cognitive decline.

Indexed as

AgingBrainPrionsProtein AggregatesAnimalsDEAD-box RNA HelicasesHumansMiceDEAD-box RNA HelicasesPrionsProtein AggregatesaggregatesagingCP: Cell biologyCP: NeurosciencekillifishN. furzeriphase separation

Identifiers

PMID38810650
PMCPMC11285089

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.