Evidence map›Paper›PMID 38810171›Full record

ArticleJCO precision oncology2024

Genetic Testing Utilization: Discrepancies Between Somatic and Germline Results in Patients With Cancer Reviewed at the UW Health Precision Medicine Molecular Tumor Board.

Isaac P Horn, Anna L Zakas, Kelcy J Smith-Simmer, Laura E Birkeland, Rachel Sundstrom, Mark E Burkard, Jennifer M Weiss

Abstract read
In one paragraph

Article in JCO precision oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Isaac P HornUniversity of Wisconsin School of Medicine and Public Health, Madison, WI.ORCID 0009-0008-2194-6272
Anna L ZakasOncology Genetics, University of Wisconsin Carbone Cancer Center, UW Health, Madison, WI.ORCID 0000-0002-4566-4842
Kelcy J Smith-SimmerOncology Genetics, University of Wisconsin Carbone Cancer Center, UW Health, Madison, WI.ORCID 0000-0001-8611-3265
Laura E BirkelandUniversity of Wisconsin School of Medicine and Public Health, Madison, WI.
Rachel SundstromOncology Genetics, University of Wisconsin Carbone Cancer Center, UW Health, Madison, WI.
Mark E BurkardOncology Genetics, University of Wisconsin Carbone Cancer Center, UW Health, Madison, WI.ORCID 0000-0002-4215-7722
Jennifer M WeissDepartment of Medicine, Division of Gastroenterology and Hepatology, University of Wisconsin School of Medicine and Public Health, Madison, WI.

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Christopher K Laubenthal · 2000 to 2026
$70.0M
NCI NIH HHS P30 CA086862
6 · The paper itself

Abstract

purposeSomatic and germline testing are increasingly used to estimate risks for patients with cancer. Although both germline testing and somatic testing can identify genetic variants that could change a patient's care and eligible treatments, the aims of these tests and their technologies are fundamentally different and cannot be used interchangeably. This study examines the timing and results of somatic and germline genetic testing for patients with cancer at UW Health.

methodsEight hundred and seventy-seven participants underwent somatic genetic testing, which was reviewed by the Precision Medicine Molecular Tumor Board (PMMTB). Patients were diagnosed with cancers, including breast, colorectal, endometrial, pancreatic, or ovarian cancer, and met National Comprehensive Cancer Network criteria for germline genetic testing. Germline testing details were collected by medical record review.

resultsThe results of this study found that only 310 patients (35%) had germline evaluation before PMMTB review. The percent of germline pathogenic/likely pathogenic variants identified in actionable genes was 28%. Most germline variants were identified in the

conclusionThis study highlights the differences in genetic testing types and demonstrates that conducting germline testing at earlier stages of diagnoses is necessary to identify potentially actionable and treatment-specific variants in patients with cancer.

Indexed as

Genetic TestingGerm-Line MutationNeoplasmsPrecision MedicineAdultAgedAged, 80 and overFemaleHumansMaleMiddle AgedYoung Adult

Identifiers

PMID38810171
PMCPMC12132614

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.