Evidence map›Paper›PMID 38808772›Full record

ArticleBioscience reports2024

UCHL1-dependent control of hypoxia-inducible factor transcriptional activity during liver fibrosis.

Amy Collins, Rebecca Scott, Caroline L Wilson, Giuseppe Abbate, Gabrielle B Ecclestone, Adam G Albanese, Demi Biddles, Steven White, Jeremy French, John Moir and 9 more

Abstract read
In one paragraph

Article in Bioscience reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Amy CollinsNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Rebecca ScottNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Caroline L WilsonNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Giuseppe AbbateFibroFind Ltd, FibroFind Laboratories, Medical School, Newcastle University, U.K.
Gabrielle B EcclestoneDepartment of Biochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology University of Liverpool, U.K.
Adam G AlbaneseDepartment of Biochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology University of Liverpool, U.K.
Demi BiddlesBiosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, U.K.
Steven WhiteDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Jeremy FrenchDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
John MoirDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Wasfi AlrawashdehDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Colin WilsonDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Sanjay PandanaboyanaDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
John S HammondDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Rohan ThakkarDepartment of HPB and Transplant Surgery, Freeman Hospital, Newcastle Upon Tyne, U.K.
Fiona OakleyNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Jelena MannNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Derek A MannNewcastle Fibrosis Research Group, Biosciences Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne, U.K.
Niall S KennethDepartment of Biochemistry, Cell and Systems Biology, Institute of Systems, Molecular and Integrative Biology University of Liverpool, U.K.

Funding

Biotechnology and Biological Sciences Research Council (BBSRC) BB/T008695/1Cancer Research UK 23390Cancer Research UK (CRUK) C18342/A23390Cancer Research UK (CRUK) DRCRPG-Nov22/100007Medical Research Council MR/K001949/1Medical Research Council (MRC) MR/K0019494/1Medical Research Council (MRC) MR/R023026/1North West Cancer Research/Mesothelioma UK NWCRMESO2023.01North West Cancer Research (NWCR) RDG2021.12Worldwide Cancer Research (WCR) 24-0353
6 · The paper itself

Abstract

Liver fibrosis is the excessive accumulation of extracellular matrix proteins that occurs in most types of chronic liver disease. At the cellular level, liver fibrosis is associated with the activation of hepatic stellate cells (HSCs) which transdifferentiate into a myofibroblast-like phenotype that is contractile, proliferative and profibrogenic. HSC transdifferentiation induces genome-wide changes in gene expression that enable the cell to adopt its profibrogenic functions. We have previously identified that the deubiquitinase ubiquitin C-terminal hydrolase 1 (UCHL1) is highly induced following HSC activation; however, the cellular targets of its deubiquitinating activity are poorly defined. Here, we describe a role for UCHL1 in regulating the levels and activity of hypoxia-inducible factor 1 (HIF1), an oxygen-sensitive transcription factor, during HSC activation and liver fibrosis. HIF1 is elevated during HSC activation and promotes the expression of profibrotic mediator HIF target genes. Increased HIF1α expression correlated with induction of UCHL1 mRNA and protein with HSC activation. Genetic deletion or chemical inhibition of UCHL1 impaired HIF activity through reduction of HIF1α levels. Furthermore, our mechanistic studies have shown that UCHL1 elevates HIF activity through specific cleavage of degradative ubiquitin chains, elevates levels of pro-fibrotic gene expression and increases proliferation rates. As we also show that UCHL1 inhibition blunts fibrogenesis in a pre-clinical 3D human liver slice model of fibrosis, these results demonstrate how small molecule inhibitors of DUBs can exert therapeutic effects through modulation of HIF transcription factors in liver disease. Furthermore, inhibition of HIF activity using UCHL1 inhibitors may represent a therapeutic opportunity with other HIF-related pathologies.

Indexed as

Hypoxia-Inducible Factor 1, alpha SubunitLiver CirrhosisUbiquitin ThiolesteraseAnimalsCell TransdifferentiationGene Expression RegulationHepatic Stellate CellsHumansMiceHif1a protein, mouseHypoxia-Inducible Factor 1, alpha SubunitUbiquitin ThiolesteraseUCHL1 protein, humanUchl1 protein, mousedeubiquitinaseDUBhypoxia inducible factorsliver fibrosisUCHL1

Identifiers

PMID38808772
PMCPMC11182734

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.