Evidence map›Paper›PMID 38806690›Full record

ArticleMolecular psychiatry2024

Mutational landscape of risk variants in comorbid depression and obesity: a next-generation sequencing approach.

Ana M Pérez-Gutiérrez, Rosario Carmona, Carlos Loucera, Jorge A Cervilla, Blanca Gutiérrez, Esther Molina, Daniel Lopez-Lopez, Javier Pérez-Florido, Juan Antonio Zarza-Rebollo, Elena López-Isac and 3 more

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In one paragraph

Article in Molecular psychiatry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Ana M Pérez-GutiérrezDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, Granada, Spain.ORCID 0000-0002-9785-8921
Rosario CarmonaPlatform for Computational Medicine, Andalusian Public Foundation Progress and Health-FPS, Seville, Spain.ORCID 0000-0002-4235-2886
Carlos LouceraPlatform for Computational Medicine, Andalusian Public Foundation Progress and Health-FPS, Seville, Spain.ORCID 0000-0001-9598-6965
Jorge A CervillaInstitute of Neurosciences "Federico Olóriz", Biomedical Research Center (CIBM), University of Granada, Granada, Spain.ORCID 0000-0001-6891-1992
Blanca GutiérrezInstitute of Neurosciences "Federico Olóriz", Biomedical Research Center (CIBM), University of Granada, Granada, Spain.ORCID 0000-0002-2750-8440
Esther MolinaInstitute of Neurosciences "Federico Olóriz", Biomedical Research Center (CIBM), University of Granada, Granada, Spain.ORCID 0000-0002-0771-7608
Daniel Lopez-LopezPlatform for Computational Medicine, Andalusian Public Foundation Progress and Health-FPS, Seville, Spain.ORCID 0000-0001-7672-7335
Javier Pérez-FloridoPlatform for Computational Medicine, Andalusian Public Foundation Progress and Health-FPS, Seville, Spain.
Juan Antonio Zarza-RebolloDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, Granada, Spain.ORCID 0000-0002-2132-7577
Elena López-IsacDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, Granada, Spain.ORCID 0000-0001-8806-5148
Joaquín DopazoPlatform for Computational Medicine, Andalusian Public Foundation Progress and Health-FPS, Seville, Spain.
Luis Javier Martínez-GonzálezGenomics Unit, Pfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research (GENYO), Granada, Spain.
Margarita RiveraDepartment of Biochemistry and Molecular Biology II, Faculty of Pharmacy, University of Granada, Granada, Spain. mrivera@ugr.es.ORCID 0000-0003-4717-1045

Funding

Consejería de Economía, Innovación, Ciencia y Empleo, Junta de Andalucía (Ministry of Economy, Innovation, Science and Employment, Government of Andalucia) CTS-2010-6682Consejería de Salud, Junta de Andalucía (Ministry of Health, Andalusian Regional Government) PI322-2009Junta de Andalucía RH-0052-2021
6 · The paper itself

Abstract

Major depression (MD) and obesity are complex genetic disorders that are frequently comorbid. However, the study of both diseases concurrently remains poorly addressed and therefore the underlying genetic mechanisms involved in this comorbidity remain largely unknown. Here we examine the contribution of common and rare variants to this comorbidity through a next-generation sequencing (NGS) approach. Specific genomic regions of interest in MD and obesity were sequenced in a group of 654 individuals from the PISMA-ep epidemiological study. We obtained variants across the entire frequency spectrum and assessed their association with comorbid MD and obesity, both at variant and gene levels. We identified 55 independent common variants and a burden of rare variants in 4 genes (PARK2, FGF21, HIST1H3D and RSRC1) associated with the comorbid phenotype. Follow-up analyses revealed significantly enriched gene-sets associated with biological processes and pathways involved in metabolic dysregulation, hormone signaling and cell cycle regulation. Our results suggest that, while risk variants specific to the comorbid phenotype have been identified, the genes functionally impacted by the risk variants share cell biological processes and signaling pathways with MD and obesity phenotypes separately. To the best of our knowledge, this is the first study involving a targeted sequencing approach toward the study of the comorbid MD and obesity. The framework presented here allowed a deep characterization of the genetics of the co-occurring MD and obesity, revealing insights into the mutational and functional profile that underlies this comorbidity and contributing to a better understanding of the relationship between these two disabling disorders.

Indexed as

ComorbidityGenetic Predisposition to DiseaseHigh-Throughput Nucleotide SequencingMajor Depressive DisorderObesityAdultDepressionFemaleGenetic VariationHumansMaleMiddle AgedMutationPhenotypePolymorphism, Single Nucleotide

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.