Evidence map›Paper›PMID 38806660›Full record

ArticleThe EMBO journal2024

A systematic exploration of bacterial form I rubisco maximal carboxylation rates.

Benoit de Pins, Lior Greenspoon, Yinon M Bar-On, Melina Shamshoum, Roee Ben-Nissan, Eliya Milshtein, Dan Davidi, Itai Sharon, Oliver Mueller-Cajar, Elad Noor and 1 more

Abstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Rubisco is slow across the tree of life.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. In vivo directed evolution of an ultrafast Rubisco from a semianaerobic environment imparts oxygen resistance.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Benoit de PinsDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0000-0002-6779-8446
Lior GreenspoonDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0000-0001-8385-4033
Yinon M Bar-OnDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0000-0001-8477-609X
Melina ShamshoumDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0009-0006-8148-7878
Roee Ben-NissanDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.
Eliya MilshteinDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0009-0005-3405-1054
Dan DavidiDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.
Itai SharonMigal Galilee Research Institute, Kiryat Shmona, 11016, Israel.ORCID http://orcid.org/0000-0003-0705-2316
Oliver Mueller-CajarSchool of Biological Sciences, Nanyang Technological University, Singapore, 637551, Singapore.ORCID http://orcid.org/0000-0003-2866-5963
Elad NoorDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel.ORCID http://orcid.org/0000-0001-8776-4799
Ron MiloDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, 76100, Israel. ron.milo@weizmann.ac.il.ORCID http://orcid.org/0000-0003-1641-2299

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autotrophy is the basis for complex life on Earth. Central to this process is rubisco-the enzyme that catalyzes almost all carbon fixation on the planet. Yet, with only a small fraction of rubisco diversity kinetically characterized so far, the underlying biological factors driving the evolution of fast rubiscos in nature remain unclear. We conducted a high-throughput kinetic characterization of over 100 bacterial form I rubiscos, the most ubiquitous group of rubisco sequences in nature, to uncover the determinants of rubisco's carboxylation velocity. We show that the presence of a carboxysome CO

Indexed as

Ribulose-Bisphosphate CarboxylaseBacteriaBacterial ProteinsCarbon DioxideCyanobacteriaKineticsBacterial ProteinsCarbon DioxideRibulose-Bisphosphate CarboxylaseCarbon FixationCarboxysomeCyanobacteriaPhotosynthesisRubisco

Identifiers

PMID38806660
PMCPMC11251275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.