Evidence map›Paper›PMID 38805282›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Deep sequencing of Phox2a nuclei reveals five classes of anterolateral system neurons.

Andrew M Bell, Charlotte Utting, Allen C Dickie, Mateusz W Kucharczyk, Raphaëlle Quillet, Maria Gutierrez-Mecinas, Aimi N B Razlan, Andrew H Cooper, Yuxuan Lan, Junichi Hachisuka and 8 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Article
  3. NaThe Journal of comparative neurology · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Central neural circuits underlying itch sensation.Nature reviews. Neuroscience · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Deep sequencing of Phox2a nuclei reveals five classes of anterolateral system neurons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Article
  18. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors.

Andrew M BellSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0001-6510-4423
Charlotte UttingEarlham Institute, Norwich NRU 7UZ, United Kingdom.ORCID 0009-0005-7998-9214
Allen C DickieSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0002-6339-2801
Mateusz W KucharczykThe Wolfson Centre for Age-Related Diseases, King's College London, London WC2R 2LS, United Kingdom.
Raphaëlle QuilletSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0009-0009-7464-6019
Maria Gutierrez-MecinasSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0002-7323-4647
Aimi N B RazlanSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0003-0703-760X
Andrew H CooperSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0003-4737-9364
Yuxuan LanEarlham Institute, Norwich NRU 7UZ, United Kingdom.ORCID 0000-0002-1652-4250
Junichi HachisukaSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0003-3987-4381
Greg A WeirSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0002-6330-2802
Kirsty BannisterThe Wolfson Centre for Age-Related Diseases, King's College London, London WC2R 2LS, United Kingdom.
Masahiko WatanabeDepartment of Anatomy, Hokkaido University School of Medicine, Sapporo 060-8638, Japan.ORCID 0000-0001-5037-7138
Artur KaniaNeural Circuit Development Research Unit, Institut de Recherches Cliniques de Montréal, Montréal, QC H2W 1R7, Canada.ORCID 0000-0002-5209-2520
Mark A HoonMolecular Genetics Section, National Institute of Dental and Craniofacial Research/NIH, Bethesda, MD 20892.ORCID 0000-0002-8794-1684
Iain C MacaulayEarlham Institute, Norwich NRU 7UZ, United Kingdom.
Franziska DenkThe Wolfson Centre for Age-Related Diseases, King's College London, London WC2R 2LS, United Kingdom.ORCID 0000-0003-4883-4234
Andrew J ToddSpinal Cord Group, School of Psychology and Neuroscience, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, United Kingdom.ORCID 0000-0002-3007-6749

Funding

Molecular Genetic Studies of SomatosensationZIADE000721 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI HOON, MARK · 2009 to 2025
$26.6M
Academy of Medical Sciences (The Academy of Medical Sciences) SGL025\1079HHS | NIH | National Institute of Dental and Craniofacial Research (NIDCR) ZIADE000721-22Medical Research Council MR/T01072X/1Medical Research Council MR/V033638/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/CCG1720/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BB/S017178/1UKRI | Biotechnology and Biological Sciences Research Council (BBSRC) BBS/E/T/000PR9816UKRI | Medical Research Council (MRC) MR/T01072X/1UKRI | Medical Research Council (MRC) MR/V033638/1UKRI | Medical Research Council (MRC) MR/W002426/1UKRI | Medical Research Council (MRC) MR/W004739/1UKRI | MRC | Medical Research Foundation MRF-160-0015-ELP-DENK-C0844Wellcome TrustWellcome Trust (WT) 204820/Z/16/ZWellcome Trust (WT) 219433/Z/19/Z
6 · The paper itself

Abstract

The anterolateral system (ALS) is a major ascending pathway from the spinal cord that projects to multiple brain areas and underlies the perception of pain, itch, and skin temperature. Despite its importance, our understanding of this system has been hampered by the considerable functional and molecular diversity of its constituent cells. Here, we use fluorescence-activated cell sorting to isolate ALS neurons belonging to the Phox2a-lineage for single-nucleus RNA sequencing. We reveal five distinct clusters of ALS neurons (ALS1-5) and document their laminar distribution in the spinal cord using in situ hybridization. We identify three clusters of neurons located predominantly in laminae I-III of the dorsal horn (ALS1-3) and two clusters with cell bodies located in deeper laminae (ALS4 and ALS5). Our findings reveal the transcriptional logic that underlies ALS neuronal diversity in the adult mouse and uncover the molecular identity of two previously identified classes of projection neurons. We also show that these molecular signatures can be used to target groups of ALS neurons using retrograde viral tracing. Overall, our findings provide a valuable resource for studying somatosensory biology and targeting subclasses of ALS neurons.

Indexed as

Homeodomain ProteinsAnimalsCell NucleusHigh-Throughput Nucleotide SequencingMaleMiceNeuronsSpinal CordTranscription FactorsHomeodomain ProteinsPhox2a protein, mouseTranscription FactorsALS projection neuronpainspinal cordtemperature sensation

Identifiers

PMID38805282
PMCPMC11161781

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.