Evidence map›Paper›PMID 38805210›Full record

ArticlePlant physiology2024

The white lupin trehalase gene LaTRE1 regulates cluster root formation and function under phosphorus deficiency.

Tianyu Xia, Xiaoqi Zhu, Yujie Zhan, Bowen Liu, Xiangxue Zhou, Qian Zhang, Weifeng Xu

Abstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Functional Genomics: From Soybean to Legume.International journal of molecular sciences · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tianyu XiaJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.ORCID 0000-0003-3447-3175
Xiaoqi ZhuJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.
Yujie ZhanJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.
Bowen LiuJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.
Xiangxue ZhouJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.ORCID 0009-0001-5284-3822
Qian ZhangJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.ORCID 0000-0003-4927-1867
Weifeng XuJoint International Research Laboratory of Water and Nutrient in Crop and College of JunCao Science and Ecology, Fujian Agriculture and Forestry University, Jinshan Fuzhou 350002, China.ORCID 0000-0002-9424-991X

Funding

Fujian Provincial Key Laboratory of Plant Functional Biology FJ-PFB20201003National Natural Science Foundation of China 31761130073Natural Science Foundation of Fujian Province 2020J01548
6 · The paper itself

Abstract

Under phosphorus (P) deficiency, white lupin (Lupinus albus L.) forms a specialized root structure, called cluster root (CR), to improve soil exploration and nutrient acquisition. Sugar signaling is thought to play a vital role in the development of CR. Trehalose and its associated metabolites are the essential sugar signal molecules that link growth and development to carbon metabolism in plants; however, their roles in the control of CR are still unclear. Here, we investigated the function of the trehalose metabolism pathway by pharmacological and genetic manipulation of the activity of trehalase in white lupin, the only enzyme that degrades trehalose into glucose. Under P deficiency, validamycin A treatment, which inhibits trehalase, led to the accumulation of trehalose and promoted the formation of CR with enhanced organic acid production, whereas overexpression of the white lupin TREHALASE1 (LaTRE1) led to decreased trehalose levels, lateral rootlet density, and organic acid production. Transcriptomic and virus-induced gene silencing results revealed that LaTRE1 negatively regulates the formation of CRs, at least partially, by the suppression of LaLBD16, whose putative ortholog in Arabidopsis (Arabidopsis thaliana) acts downstream of ARF7- and ARF19-dependent auxin signaling in lateral root formation. Overall, our findings provide an association between the trehalose metabolism gene LaTRE1 and CR formation and function with respect to organic acid production in white lupin under P deficiency.

Indexed as

Gene Expression Regulation, PlantLupinusPhosphorusPlant ProteinsPlant RootsTrehalaseTrehaloseInositolPlants, Genetically ModifiedInositolPhosphorusPlant ProteinsTrehalaseTrehalosevalidamycin A

Identifiers

PMID38805210
PMCPMC11637477

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.