Evidence map›Paper›PMID 38805187›Full record

ArticleGenetics2024

Posttranscriptional regulation of the T-box gene midline via the 3'UTR in Drosophila is complex and cell- and tissue-dependent.

Kalpana Makhijani, Jordan Mar, Ivana Gaziova, Krishna Moorthi Bhat

Abstract read
In one paragraph

Article in Genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Kalpana MakhijaniDepartment of Molecular Medicine, University of South Florida, Tampa, FL 33613, USA.
Jordan MarDepartment of Molecular Medicine, University of South Florida, Tampa, FL 33613, USA.
Ivana GaziovaDepartment of Neuroscience and Cell Biology, University of Texas Medical Branch School of Medicine, Galveston, TX 77555, USA.
Krishna Moorthi BhatDepartment of Molecular Medicine, University of South Florida, Tampa, FL 33613, USA.ORCID 0000-0001-6783-1894

Funding

Functional role of Sec20, a BH3 and Secretory (Sec) domain protein, in neurons and its relevance to a motor neuron disease in DrosophilaRF1NS131315 · NINDS · UNIVERSITY OF SOUTH FLORIDA · PI BHAT, KRISHNA MOORTHI · 2023 to 2023
$1.4M
Developmental genetics of neural stem cellsR01GM127478 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI BHAT, KRISHNA MOORTHI · 2018 to 2021
$1.2M
NIGMS NIH HHS R01 GM127478NIH-NIGMS GM127478NINDS NIH HHS RF1 NS131315
6 · The paper itself

Abstract

The T-box (Tbx) proteins have a 180-230 amino acid DNA-binding domain, first reported in the Brachyury (T) protein. They are highly conserved among metazoans. They regulate a multitude of cellular functions in development and disease. Here, we report posttranscriptional and translational regulation of midline (mid), a Tbx member in Drosophila. We found that the 3'UTR of mid has mRNA degradation elements and AT-rich sequences. In Schneider S2 cells, mid-mRNA could be detected only when the transgene was without the 3'UTR. Similarly, the 3'UTR linked to the Renilla luciferase reporter significantly reduced the activity of the Luciferase, whereas deleting only the degradation elements from the 3'UTR resulted in reduced activity, but not as much. Overexpression of mid in MP2, an embryonic neuroblast, showed no significant difference in the levels of mid-mRNA between the 2 transgenes, with and without the 3'UTR, indicating the absence of posttranscriptional regulation of mid in MP2. Moreover, while elevated mid-RNA was detected in MP2 in nearly all hemisegments, only a fifth of those hemisegments had elevated levels of the protein. Overexpression of the 2 transgenes resulted in MP2-lineage defects at about the same frequency. These results indicate a translational/posttranslational regulation of mid in MP2. The regulation of ectopically expressed mid in the wing imaginal disc was complex. In the wing disc, where mid is not expressed, the ectopic expression of the transgene lacking the 3'UTR had a higher level of mid-RNA and the protein had a stronger phenotypic effect. These results indicate that the 3'UTR can subject mid-mRNA to degradation in a cell- and tissue-specific manner. We further report a balancer-mediated transgenerational modifier effect on the expression and gain of function effects of the 2 transgenes.

Indexed as

3' Untranslated RegionsDrosophila ProteinsT-Box Domain ProteinsAnimalsCell LineDrosophilaDrosophila melanogasterGene Expression Regulation, DevelopmentalOrgan SpecificityRNA, MessengerRNA Processing, Post-TranscriptionalRNA StabilityWings, Animal3' Untranslated RegionsDrosophila Proteinsmid protein, DrosophilaRNA, MessengerT-Box Domain Proteins3′UTRcell cultureDrosophilaexperimental technologygeneticsmidline genetranscription

Identifiers

PMID38805187
PMCPMC12257944

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.