Evidence map›Paper›PMID 38804848›Full record

ArticleImmunity, inflammation and disease2024

Construction of an immune-related prognostic model and potential drugs screening for esophageal cancer based on bioinformatics analyses and network pharmacology.

Pengju Qi, Bo Qi, Chengwei Gu, Shuhua Huo, Xinchen Dang, Yuzhen Liu, Baosheng Zhao

Abstract read
In one paragraph

Article in Immunity, inflammation and disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Pengju QiDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Bo QiDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Chengwei GuDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Shuhua HuoDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Xinchen DangDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Yuzhen LiuDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.
Baosheng ZhaoDepartment of Thoracic Surgery, The First Affiliated Hospital of Xinxiang Medical University, Weihui, Henan, China.ORCID 0000-0002-7854-111X

Funding

Key Medical Scientific and Technological Project of Henan Province SBGJ202102188Key Project of Science and Technology of Xinxiang GG2020027
6 · The paper itself

Abstract

backgroundEsophageal cancer (ESCA) is a highly invasive malignant tumor with poor prognosis. This study aimed to discover a generalized and high-sensitivity immune prognostic signature that could stratify ESCA patients and predict their overall survival, and to discover potential therapeutic drugs by the connectivity map.

methodsThe key gene modules significantly related to clinical traits (survival time and state) of ESCA patients were selected by weighted gene coexpression network analysis (WCGNA), then the univariate and least absolute shrinkage and selection operator (LASSO) Cox regression analyses were used to construct a 15-immune-related gene prognostic signature.

resultsThe immune-related risk model was related to clinical and pathologic factors and remained an effective independent prognostic factor. Enrichment analyses revealed that the differentially expressed genes (DEGs) of the high- and low-risk groups were associated with tumor cell proliferation and immune mechanisms. Based on the gathered data, a small molecule drug named perphenazine (PPZ) was elected. The pharmacological analysis indicates that PPZ could help in adjuvant therapy of ESCA through regulation of metabolic process and cellular proliferation, enhancement of immunologic functions, and inhibition of inflammatory reactions. Furthermore, molecular docking was performed to explore and verify the PPZ-core target interactions.

conclusionWe succeed in structuring the immune-related prognostic model, which could be used to distinguish and predict patients' survival outcome, and screening a small molecule drug named PPZ. Prospective studies also are needed to further validate its analytical accuracy for estimating prognoses and confirm the potential use of PPZ for treating ESCA.

Indexed as

Computational BiologyEsophageal NeoplasmsNetwork PharmacologyAntineoplastic AgentsBiomarkers, TumorFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansMaleMolecular Docking SimulationPrognosisAntineoplastic AgentsBiomarkers, Tumoresophageal cancerimmune‐related genelong noncoding RNAnetwork pharmacologyperphenazineprognostic model

Identifiers

PMID38804848
PMCPMC11131936

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