Evidence map›Paper›PMID 38802343›Full record

ArticleNature communications2024

Apo and Aβ46-bound γ-secretase structures provide insights into amyloid-β processing by the APH-1B isoform.

Ivica Odorčić, Mohamed Belal Hamed, Sam Lismont, Lucía Chávez-Gutiérrez, Rouslan G Efremov

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ivica OdorčićCenter for Structural Biology, VIB, Brussels, Belgium.ORCID http://orcid.org/0000-0002-8121-3803
Mohamed Belal HamedVIB-KU Leuven Center for Brain & Disease Research, Herestraat 49 box 602, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0002-6383-4147
Sam LismontVIB-KU Leuven Center for Brain & Disease Research, Herestraat 49 box 602, 3000, Leuven, Belgium.
Lucía Chávez-GutiérrezVIB-KU Leuven Center for Brain & Disease Research, Herestraat 49 box 602, 3000, Leuven, Belgium. Lucia.ChavezGutierrez@kuleuven.be.
Rouslan G EfremovCenter for Structural Biology, VIB, Brussels, Belgium. Rouslan.Efremov@vub.be.ORCID http://orcid.org/0000-0001-7516-8658

Funding

Fonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G008023NFonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G054617NFonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G0B2519NFonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G0H5916N
6 · The paper itself

Abstract

Deposition of amyloid-β (Aβ) peptides in the brain is a hallmark of Alzheimer's disease. Aβs are generated through sequential proteolysis of the amyloid precursor protein by the γ-secretase complexes (GSECs). Aβ peptide length, modulated by the Presenilin (PSEN) and APH-1 subunits of GSEC, is critical for Alzheimer's pathogenesis. Despite high relevance, mechanistic understanding of the proteolysis of Aβ, and its modulation by APH-1, remain incomplete. Here, we report cryo-EM structures of human GSEC (PSEN1/APH-1B) reconstituted into lipid nanodiscs in apo form and in complex with the intermediate Aβ46 substrate without cross-linking. We find that three non-conserved and structurally divergent APH-1 regions establish contacts with PSEN1, and that substrate-binding induces concerted rearrangements in one of the identified PSEN1/APH-1 interfaces, providing structural basis for APH-1 allosteric-like effects. In addition, the GSEC-Aβ46 structure reveals an interaction between Aβ46 and loop 1

Indexed as

Amyloid beta-PeptidesAmyloid Precursor Protein SecretasesCryoelectron MicroscopyMembrane ProteinsPresenilin-1Alzheimer DiseaseAmyloid beta-Protein PrecursorEndopeptidasesHumansModels, MolecularPeptide FragmentsPeptide HydrolasesProtein BindingProtein IsoformsProteolysisAmyloid beta-PeptidesAmyloid beta-Protein PrecursorAmyloid Precursor Protein SecretasesAPH1B protein, humanEndopeptidasesMembrane ProteinsPeptide FragmentsPeptide HydrolasesPresenilin-1Protein IsoformsPSEN1 protein, human

Identifiers

PMID38802343
PMCPMC11130327

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.