Evidence map›Paper›PMID 38801230›Full record

ArticleProtein science : a publication of the Protein Society2024

Site-directed mutagenesis reveals the interplay between stability, structure, and enzymatic activity in RidA from Capra hircus.

Giulia Rizzi, Stefania Digiovanni, Genny Degani, Alberto Barbiroli, Flavio Di Pisa, Laura Popolo, Cristina Visentin, Maria Antonietta Vanoni, Stefano Ricagno

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Giulia RizziDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Stefania DigiovanniDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Genny DeganiDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Alberto BarbiroliDipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, Milan, Italy.
Flavio Di PisaIstituto di Biofisica, Consiglio Nazionale delle Ricerche, Milan, Italy.
Laura PopoloDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.
Cristina VisentinDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.ORCID 0000-0003-2705-1417
Maria Antonietta VanoniDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.ORCID 0000-0001-7213-732X
Stefano RicagnoDipartimento di Bioscienze, Università degli Studi di Milano, Milan, Italy.

Funding

Fondazione Baggi SisiniItalian Ministry of HealthItalian Ministry of Research PRIN 20207XLJB2
6 · The paper itself

Abstract

Reactive intermediate deaminase A (RidA) is a highly conserved enzyme that catalyzes the hydrolysis of 2-imino acids to the corresponding 2-keto acids and ammonia. RidA thus prevents the accumulation of such potentially harmful compounds in the cell, as exemplified by its role in the degradation of 2-aminoacrylate, formed during the metabolism of cysteine and serine, catalyzing the conversion of its stable 2-iminopyruvate tautomer into pyruvate. Capra hircus (goat) RidA (

Indexed as

Enzyme StabilityMutagenesis, Site-DirectedAnimalsCatalytic DomainModels, MolecularSubstrate Specificity2‐aminoacrylate2‐imino acidsmetabolic damageprotein stabilityreactive intermediate deaminase ARidAx‐ray crystallography

Identifiers

PMID38801230
PMCPMC11129622

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.