Evidence map›Paper›PMID 38800117›Full record

ArticleCABI agriculture and bioscience2023

The UK Crop Microbiome Cryobank: a utility and model for supporting Phytobiomes research.

Matthew J Ryan, Tim H Mauchline, Jacob G Malone, Susan Jones, Catriona M A Thompson, J Miguel Bonnin, Helen Stewart, Payton T O Yau, Rodrigo G Taketani, Ian M Clark and 1 more

Abstract read
In one paragraph

Article in CABI agriculture and bioscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Matthew J RyanCABI, Bakeham Lane, Egham, Surrey, TW20 9TY UK.ORCID 0000-0002-3689-6609
Tim H MauchlineRothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ UK.
Jacob G MaloneJohn Innes Centre, Norwich Research Park, Colney Ln, Norwich, NR4 7UH UK.
Susan JonesInformation and Computational Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA UK.
Catriona M A ThompsonJohn Innes Centre, Norwich Research Park, Colney Ln, Norwich, NR4 7UH UK.
J Miguel BonninCABI, Bakeham Lane, Egham, Surrey, TW20 9TY UK.
Helen StewartCABI, Bakeham Lane, Egham, Surrey, TW20 9TY UK.
Payton T O YauScotland's Rural College (SRUC), AB21 9YA Aberdeen, UK.
Rodrigo G TaketaniRothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ UK.
Ian M ClarkRothamsted Research, West Common, Harpenden, Hertfordshire, AL5 2JQ UK.
Nicola HoldenScotland's Rural College (SRUC), AB21 9YA Aberdeen, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant microbiomes are the microbial communities essential to the functioning of the phytobiome-the system that consist of plants, their environment, and their associated communities of organisms. A healthy, functional phytobiome is critical to crop health, improved yields and quality food. However, crop microbiomes are relatively under-researched, and this is associated with a fundamental need to underpin phytobiome research through the provision of a supporting infrastructure. The UK Crop Microbiome Cryobank (UKCMC) project is developing a unique, integrated and open-access resource to enable the development of solutions to improve soil and crop health. Six economically important crops (Barley, Fava Bean, Oats, Oil Seed Rape, Sugar Beet and Wheat) are targeted, and the methods as well as data outputs will underpin research activity both in the UK and internationally. This manuscript describes the approaches being taken, from characterisation, cryopreservation and analysis of the crop microbiome through to potential applications. We believe that the model research framework proposed is transferable to different crop and soil systems, acting not only as a mechanism to conserve biodiversity, but as a potential facilitator of sustainable agriculture systems.

Indexed as

BiobankMetagenomeMicrobiomeMicrobiotaRhizosphereSoil health

Identifiers

PMID38800117
PMCPMC11116202

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.