Evidence map›Paper›PMID 38798598›Full record

ArticlebioRxiv : the preprint server for biology2024

Analysis of developmental gene expression using smFISH and

Laura Breimann, Ella Bahry, Marwan Zouinkhi, Klim Kolyvanov, Lena Annika Street, Stephan Preibisch, Sevinç Ercan

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Laura BreimannBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID 0000-0001-7702-5749
Ella BahryBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.ORCID 0000-0002-6358-2576
Marwan ZouinkhiJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-9441-2908
Klim KolyvanovBerlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany.
Lena Annika StreetDepartment of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.ORCID 0000-0002-5473-6713
Stephan PreibischJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, USA.ORCID 0000-0002-0276-494X
Sevinç ErcanDepartment of Biology, Center for Genomics and Systems Biology, New York University, New York, NY, USA.ORCID 0000-0001-7297-1648

Funding

Mechanisms of condensin-mediated gene regulation in C. elegansR35GM130311 · NIGMS · NEW YORK UNIVERSITY · PI Sevinc Ercan · 2019 to 2026
$3.3M
NIGMS NIH HHS R35 GM130311
6 · The paper itself

Abstract

Regulation of transcription during embryogenesis is key to development and differentiation. To study transcript expression throughout

Indexed as

C. eleganscondensinDCCdevelopmentdosage compensationembryogenesisgene regulationsex determinationsmFISHtranscription bursttranscription frequencyX chromosome

Identifiers

PMID38798598
PMCPMC11118362

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.