Evidence map›Paper›PMID 38796536›Full record

ArticleCommunications chemistry2024

Foldamers controlled by functional triamino acids: structural investigation of α/γ-hybrid oligopeptides.

David Just, Vladimír Palivec, Kateřina Bártová, Lucie Bednárová, Markéta Pazderková, Ivana Císařová, Hector Martinez-Seara, Ullrich Jahn

Abstract read
In one paragraph

Article in Communications chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

David JustInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic.ORCID http://orcid.org/0000-0002-9606-9365
Vladimír PalivecInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic.
Kateřina BártováInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic.
Lucie BednárováInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic.
Markéta PazderkováInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic.
Ivana CísařováDepartment of Inorganic Chemistry, Faculty of Science, Charles University in Prague, Hlavova 2030/8, 12843, Prague 2, Czech Republic.ORCID http://orcid.org/0000-0002-9612-9831
Hector Martinez-SearaInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic. hseara@gmail.com.ORCID http://orcid.org/0000-0001-9716-1713
Ullrich JahnInstitute of Organic Chemistry and Biochemistry, Czech Academy of Sciences, Flemingovo náměstí 2, 16610, Prague 6, Czech Republic. ullrich.jahn@uochb.cas.cz.ORCID http://orcid.org/0000-0001-8386-1348

Funding

Academy of Sciences of the Czech Republic | Ústav Organické Chemie a Biochemie, Akademie Věd České Republiky (Institute of Organic Chemistry and Biochemistry, CAS) RVO: 61388963EC | European Regional Development Fund (Europski Fond za Regionalni Razvoj) No.CZ.02.1.01/0.0/0.0/16_019/0000729
6 · The paper itself

Abstract

Peptide-like foldamers controlled by normal amide backbone hydrogen bonding have been extensively studied, and their folding patterns largely rely on configurational and conformational constraints induced by the steric properties of backbone substituents at appropriate positions. In contrast, opportunities to influence peptide secondary structure by functional groups forming individual hydrogen bond networks have not received much attention. Here, peptide-like foldamers consisting of alternating α,β,γ-triamino acids 3-amino-4-(aminomethyl)-2-methylpyrrolidine-3-carboxylate (AAMP) and natural amino acids glycine and alanine are reported, which were obtained by solution phase peptide synthesis. They form ordered secondary structures, which are dominated by a three-dimensional bridged triazaspiranoid-like hydrogen bond network involving the non-backbone amino groups, the backbone amide hydrogen bonds, and the relative configuration of the α,β,γ-triamino and α-amino acid building blocks. This additional stabilization leads to folding in both nonpolar organic as well as in aqueous environments. The three-dimensional arrangement of the individual foldamers is supported by X-ray crystallography, NMR spectroscopy, chiroptical methods, and molecular dynamics simulations.

Identifiers

PMID38796536
PMCPMC11128005

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