Evidence map›Paper›PMID 38796416›Full record

ArticleMicrobial cell factories2024

Optimizing enzyme properties to enhance dihydroxyacetone production via methylglyoxal biosensor development.

Kaibo Zhang, Mengying Li, Jinsheng Wang, Guozhong Huang, Kang Ma, Jiani Peng, Haoyue Lin, Chunjie Zhang, Honglei Wang, Tao Zhan and 2 more

Abstract read
In one paragraph

Article in Microbial cell factories, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kaibo ZhangSchool of Chemistry and Life Science, Changchun University of Technology, Changchun, 130012, Jilin, China.
Mengying LiTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Jinsheng WangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Guozhong HuangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Kang MaTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Jiani PengTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China.
Haoyue LinSchool of Chemistry and Life Science, Changchun University of Technology, Changchun, 130012, Jilin, China.
Chunjie ZhangSchool of Chemistry and Life Science, Changchun University of Technology, Changchun, 130012, Jilin, China.
Honglei WangSchool of Chemistry and Life Science, Changchun University of Technology, Changchun, 130012, Jilin, China. wanghonglei@ccut.edu.cn.
Tao ZhanTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. elgar612@163.com.
Zhe SunTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. sunzhe@tib.cas.cn.
Xueli ZhangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. zhang_xl@tib.cas.cn.

Funding

National Key Research and Development Program of China 2022YFC2106200National Natural Science Foundation of China 32270031Tianjin Synthetic Biotechnology Innovation Capacity Improvement Project TSBICIP-CXRC-064
6 · The paper itself

Abstract

backgroundDihydroxyacetone (DHA) stands as a crucial chemical material extensively utilized in the cosmetics industry. DHA production through the dephosphorylation of dihydroxyacetone phosphate, an intermediate product of the glycolysis pathway in Escherichia coli, presents a prospective alternative for industrial production. However, insights into the pivotal enzyme, dihydroxyacetone phosphate dephosphorylase (HdpA), remain limited for informed engineering. Consequently, the development of an efficient tool for high-throughput screening of HdpA hypermutants becomes imperative.

resultsThis study introduces a methylglyoxal biosensor, based on the formaldehyde-responding regulator FrmR, for the selection of HdpA. Initial modifications involved the insertion of the FrmR binding site upstream of the -35 region and into the spacer region between the -10 and -35 regions of the constitutive promoter J23110. Although the hybrid promoter retained constitutive expression, expression of FrmR led to complete repression. The addition of 350 μM methylglyoxal promptly alleviated FrmR inhibition, enhancing promoter activity by more than 40-fold. The methylglyoxal biosensor system exhibited a gradual increase in fluorescence intensity with methylglyoxal concentrations ranging from 10 to 500 μM. Notably, the biosensor system responded to methylglyoxal spontaneously converted from added DHA, facilitating the separation of DHA producing and non-producing strains through flow cytometry sorting. Subsequently, the methylglyoxal biosensor was successfully applied to screen a library of HdpA mutants, identifying two strains harboring specific mutants 267G > T and D110G/G151C that showed improved DHA production by 68% and 114%, respectively. Expressing of these two HdpA mutants directly in a DHA-producing strain also increased DHA production from 1.45 to 1.92 and 2.29 g/L, respectively, demonstrating the enhanced enzyme properties of the HdpA mutants.

conclusionsThe methylglyoxal biosensor offers a novel strategy for constructing genetically encoded biosensors and serves as a robust platform for indirectly determining DHA levels by responding to methylglyoxal. This property enables efficiently screening of HdpA hypermutants to enhance DHA production.

Indexed as

Biosensing TechniquesDihydroxyacetoneEscherichia coliPyruvaldehydeEscherichia coli ProteinsMetabolic EngineeringPromoter Regions, GeneticDihydroxyacetoneEscherichia coli ProteinsPyruvaldehydeDihydroxyacetoneDihydroxyacetone phosphate dephosphorylaseEscherichia coliHigh-throughput screeningMethylglyoxal biosensor

Identifiers

PMID38796416
PMCPMC11127321

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.