Evidence map›Paper›PMID 38795827›Full record

ArticleBiochimica et biophysica acta. Molecular and cell biology of lipids2024

Phospholipid isotope tracing suggests β-catenin-driven suppression of phosphatidylcholine metabolism in hepatocellular carcinoma.

Chad VanSant-Webb, Hayden K Low, Junko Kuramoto, Claire E Stanley, Hantao Qiang, Audrey Y Su, Alexis N Ross, Chad G Cooper, James E Cox, Scott A Summers and 2 more

Abstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular and cell biology of lipids, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Chad VanSant-WebbDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Hayden K LowDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Junko KuramotoDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA; Department of Pathology, Keio University School of Medicine, Tokyo 160-8582, Japan.
Claire E StanleyDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Hantao QiangDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Audrey Y SuDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Alexis N RossDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA.
Chad G CooperDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
James E CoxDepartment of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA.
Scott A SummersDepartment of Nutrition and Integrative Physiology, University of Utah College of Health, Salt Lake City, UT 84112, USA.
Kimberley J EvasonDepartment of Pathology, University of Utah School of Medicine, Salt Lake City, UT 84112, USA; Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA. Electronic address: kimberley.evason@hci.utah.edu.
Gregory S DuckerHuntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA; Department of Biochemistry, University of Utah School of Medicine, Salt Lake City, UT 84112, USA. Electronic address: greg.ducker@biochem.utah.edu.

Funding

The Role of Ceramides in Skeletal MuscleR01DK115824 · NIDDK · UNIVERSITY OF UTAH · PI SUMMERS, SCOTT A · 2018 to 2021
$2.6M
The Role of Ceramides in the Pancreatic Beta CellR01DK130296 · NIDDK · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI HOLLAND, WILLIAM L, SUMMERS, SCOTT A · 2022 to 2025
$2.2M
Targeting a Ceramide Double Bond to Treat Cardiometabolic DisordersR01DK122001 · NIDDK · UNIVERSITY OF UTAH · PI SUMMERS, SCOTT A · 2019 to 2022
$1.9M
Serotonergic antidepressants as liver tumor preventivesR01CA222570 · NCI · UNIVERSITY OF UTAH · PI EVASON, KIMBERLEY JANE · 2018 to 2022
$1.8M
Glycine metabolism in cancer - Research Supplement to Promote Diversity in Health-Related Research; VelascoR00CA215307 · NCI · UNIVERSITY OF UTAH · PI DUCKER, GREGORY S · 2019 to 2021
$814k
The role of sphingolipids in the pancreatic beta cellR21DK073181 · NIDDK · UNIVERSITY OF UTAH · PI SUMMERS, SCOTT A · 2006 to 2007
$482k
NCI NIH HHS R00 CA215307NCI NIH HHS R01 CA222570NIDDK NIH HHS R01 DK115824NIDDK NIH HHS R01 DK122001NIDDK NIH HHS R21 DK073181
6 · The paper itself

Abstract

Activating mutations in the CTNNB1 gene encoding β-catenin are among the most frequently observed oncogenic alterations in hepatocellular carcinoma (HCC). Profound alterations in lipid metabolism, including increases in fatty acid oxidation and transformation of the phospholipidome, occur in HCC with CTNNB1 mutations, but it is unclear what mechanisms give rise to these changes. We employed untargeted lipidomics and targeted isotope tracing to measure phospholipid synthesis activity in an inducible human liver cell line expressing mutant β-catenin, as well as in transgenic zebrafish with activated β-catenin-driven HCC. In both models, activated β-catenin expression was associated with large changes in the lipidome including conserved increases in acylcarnitines and ceramides and decreases in triglycerides. Lipid isotope tracing analysis in human cells revealed a reduction in phosphatidylcholine (PC) production rates as assayed by choline incorporation. We developed lipid isotope tracing analysis for zebrafish tumors and observed reductions in phosphatidylcholine synthesis by both the CDP-choline and PEMT pathways. The observed changes in the β-catenin-driven HCC phospholipidome suggest that zebrafish can recapitulate conserved features of HCC lipid metabolism and may serve as a model for identifying future HCC-specific lipid metabolic targets.

Indexed as

beta CateninCarcinoma, HepatocellularLiver NeoplasmsPhosphatidylcholinesZebrafishAnimalsAnimals, Genetically ModifiedCell Line, TumorHumansLipid MetabolismLipidomicsPhospholipidsbeta CateninCTNNB1 protein, humanPhosphatidylcholinesPhospholipidsCeramidesHepatocellular carcinomaIsotope tracingLipid metabolismPhospholipidsZebrafish

Identifiers

PMID38795827
PMCPMC11864496

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.