Evidence map›Paper›PMID 38793620›Full record

ArticleViruses2024

PSPC1 Binds to HCV IRES and Prevents Ribosomal Protein S5 Binding, Inhibiting Viral RNA Translation.

Sachin Kumar Tripathi, Ashish Aneja, Teji Borgaonkar, Saumitra Das

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sachin Kumar TripathiDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, Karnataka, India.
Ashish AnejaDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, Karnataka, India.
Teji BorgaonkarDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, Karnataka, India.ORCID 0000-0002-1858-3326
Saumitra DasDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, Karnataka, India.ORCID 0000-0002-0640-3586

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis C virus (HCV) infects the human liver, and its chronic infection is one of the major causes of Hepatocellular carcinoma. Translation of HCV RNA is mediated by an Internal Ribosome Entry Site (IRES) element located in the 5'UTR of viral RNA. Several RNA Binding proteins of the host interact with the HCV IRES and modulate its function. Here, we demonstrate that PSPC1 (Paraspeckle Component 1), an essential paraspeckle component, upon HCV infection is relocalized and interacts with HCV IRES to prevent viral RNA translation. Competition UV-crosslinking experiments showed that PSPC1 interacts explicitly with the SLIV region of the HCV IRES, which is known to play a vital role in ribosomal loading to the HCV IRES via interaction with Ribosomal protein S5 (RPS5). Partial silencing of PSPC1 increased viral RNA translation and, consequently, HCV replication, suggesting a negative regulation by PSPC1. Interestingly, the silencing of PSPC1 protein leads to an increased interaction of RPS5 at the SLIV region, leading to an overall increase in the viral RNA in polysomes. Overall, our results showed how the host counters viral infection by relocalizing nuclear protein to the cytoplasm as a survival strategy.

Indexed as

HepacivirusInternal Ribosome Entry SitesProtein BiosynthesisRibosomal ProteinsRNA-Binding ProteinsRNA, ViralHepatitis CHost-Pathogen InteractionsHumansProtein BindingVirus ReplicationInternal Ribosome Entry SitesRibosomal Proteinsribosomal protein S5RNA-Binding ProteinsRNA, Viralhepatitis C virusIRESparaspecklesPSPC1ribosomal protein S5

Identifiers

PMID38793620
PMCPMC11126058

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.