Evidence map›Paper›PMID 38793539›Full record

ArticleViruses2024

Wide Real-Life Data Support Reduced Sensitivity of Antigen Tests for Omicron SARS-CoV-2 Infections.

Chiara Piubelli, Davide Treggiari, Denise Lavezzari, Michela Deiana, Klevia Dishnica, Emma Maria Sole Tosato, Cristina Mazzi, Paolo Cattaneo, Antonio Mori, Elena Pomari and 9 more

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Chiara PiubelliDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0002-5739-3795
Davide TreggiariDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Denise LavezzariDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0003-2859-5424
Michela DeianaDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0001-7595-2346
Klevia DishnicaDepartment of Biotechnology, University of Verona, 37124 Verona, Italy.
Emma Maria Sole TosatoDepartment of Biotechnology, University of Verona, 37124 Verona, Italy.
Cristina MazziCentre for Clinical Research, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0002-4561-3447
Paolo CattaneoDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0002-2016-3224
Antonio MoriDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0003-2845-5931
Elena PomariDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0002-5182-0231
Lavinia NicoliniDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Martina LeonardiDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Francesca PerandinDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0003-3933-3892
Fabio FormentiDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0003-3203-0872
Alejandro GiorgettiDepartment of Biotechnology, University of Verona, 37124 Verona, Italy.ORCID 0000-0001-8738-6150
Antonio ContiClinical Analysis Laboratory and Transfusional Service, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Maria Rosaria CapobianchiDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Federico Giovanni GobbiDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.
Concetta CastillettiDepartment of Infectious, Tropical Diseases and Microbiology, IRCCS Sacro Cuore-Don Calabria Hospital, Negrar di Valpolicella, 37124 Verona, Italy.ORCID 0000-0001-9819-236X

Funding

European Union PE00000007, INF-ACTMinistero della Salute Fondi Ricerca Corrente" project L1P6
6 · The paper itself

Abstract

With the continuous spread of new SARS-CoV-2 variants of concern (VOCs), the monitoring of diagnostic test performances is mandatory. We evaluated the changes in antigen diagnostic tests' (ADTs) accuracy along the Delta to Omicron VOCs transition, exploring the N protein mutations possibly affecting ADT sensitivity and assessing the best sampling site for the diagnosis of Omicron infections. In total, 5175 subjects were enrolled from 1 October 2021 to 15 July 2022. The inclusion criteria were SARS-CoV-2 ADT combined with a same-day RT-PCR swab test. For the sampling site analysis, 61 patients were prospectively recruited during the Omicron period for nasal and oral swab analyses by RT-PCR. Next-Generation Sequencing data were obtained to evaluate the different sublineages. Using RT-PCR as a reference, 387 subjects resulted in becoming infected and the overall sensitivity of the ADT decreased from 63% in the Delta period to 33% in the Omicron period. This decrease was highly statistically significant (

Indexed as

COVID-19SARS-CoV-2Sensitivity and SpecificityAdultAgedAntigens, ViralCOVID-19 Serological TestingFemaleHumansMaleMiddle AgedMutationProspective StudiesRNA, ViralViral LoadAntigens, ViralRNA, Viralantigenic rapid testDelta variantdiagnosismolecular testmouth site samplingNGSnose site samplingnucleocapsid proteinOmicron variantSARS-CoV-2variant of concern (VOC)

Identifiers

PMID38793539
PMCPMC11125898

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.