Evidence map›Paper›PMID 38792758›Full record

ArticleMicroorganisms2024

Influence of Compost Amendments on Soil and Human Gastrointestinal Bacterial Communities during a Single Gardening Season.

Sihan Bu, Alyssa W Beavers, Kameron Y Sugino, Sarah F Keller, Katherine Alaimo, Sarah S Comstock

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microorganisms, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sihan BuDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, MI 48824, USA.
Alyssa W BeaversDepartment of Nutrition and Food Science, Wayne State University, Detroit, MI 48201, USA.
Kameron Y SuginoDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, MI 48824, USA.
Sarah F KellerDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, MI 48824, USA.
Katherine AlaimoDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, MI 48824, USA.
Sarah S ComstockDepartment of Food Science and Human Nutrition, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0003-3107-7652

Funding

National Institute of Food and Agriculture MICL08568 accession number 1019162Wayne State University faculty research funds
6 · The paper itself

Abstract

To measure associations between gardening with different compost amendments and the human gut microbiota composition, gardeners (n = 25) were provided with one of three types of compost: chicken manure (CM), dairy manure and plant material (DMP), or plant-based (P). Stool samples were collected before gardening (T1), after compost amendment (T2), and at peak garden harvest (T3). Compost and soil samples were collected. DNA was extracted, 16S rRNA libraries were established, and libraries were sequenced by Illumina MiSeq. Sequences were processed using mothur, and data were analyzed in R software version 4.2.2. Fast expectation-maximization microbial source tracking analysis was used to determine stool bacteria sources. At T2/T3, the gut microbiotas of P participants had the lowest Shannon alpha diversity, which was also the trend at T1. In stool from T2,

Indexed as

bacteriabacterial communitiescompostgardeninghumanmicrobiomemicrobiotasoil

Identifiers

PMID38792758
PMCPMC11123992

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.