Evidence map›Paper›PMID 38791553›Full record

ArticleInternational journal of molecular sciences2024

The Long Non-Coding RNA MALAT1 Modulates NR4A1 Expression through a Downstream Regulatory Element in Specific Cancer Cell Types.

Sara Wernig-Zorc, Uwe Schwartz, Paulina Martínez-Rodríguez, Josefa Inalef, Francisca Pavicic, Pamela Ehrenfeld, Gernot Längst, Rodrigo Maldonado

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. The Role of Long Noncoding RNAs in Modulation of Stress Granules in Cancer.Journal of cellular and molecular medicine · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Long non-coding RNAs: Key regulators of stemness in breast cancer.Frontiers in cell and developmental biology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sara Wernig-ZorcRegensburg Center for Biochemistry [RCB], Universität Regensburg, 93053 Regensburg, Germany.ORCID 0000-0002-4377-7982
Uwe SchwartzNGS Analysis Center, Biology and Pre-Clinical Medicine, Universität Regensburg, 93053 Regensburg, Germany.
Paulina Martínez-RodríguezPrograma de Doctorado en Ciencias, mención Biología Celular y Molecular Aplicada, Universidad de La Frontera, Temuco 4811230, Chile.ORCID 0000-0003-1718-3387
Josefa InalefInstitute of Anatomy, Histology, and Pathology, Faculty of Medicine, Universidad Austral de Chile, 5090000 Valdivia, Chile.
Francisca PavicicInstitute of Anatomy, Histology, and Pathology, Faculty of Medicine, Universidad Austral de Chile, 5090000 Valdivia, Chile.
Pamela EhrenfeldInstitute of Anatomy, Histology, and Pathology, Faculty of Medicine, Universidad Austral de Chile, 5090000 Valdivia, Chile.ORCID 0000-0002-2519-7570
Gernot LängstRegensburg Center for Biochemistry [RCB], Universität Regensburg, 93053 Regensburg, Germany.ORCID 0000-0002-8232-1179
Rodrigo MaldonadoFacultad de Medicina y Ciencias, Universidad San Sebastián, 5110246 Valdivia, Chile.ORCID 0000-0002-4648-6697

Funding

Deutsche Forschungsgemeinschaft LA1331Deutsche Forschungsgemeinschaft SFB960Fondo Nacional de Desarrollo Científico y Tecnológico 11190246Universidad San Sebastián USS-FIN-24-APCS-16
6 · The paper itself

Abstract

Long non-coding RNAs (lncRNAs) have been shown to modulate gene expression and are involved in the initiation and progression of various cancer types. Despite the wealth of studies describing transcriptome changes upon lncRNA knockdown, there is limited information describing lncRNA-mediated effects on regulatory elements (REs) modulating gene expression. In this study, we investigated how the metastasis-associated lung adenocarcinoma transcript 1 (MALAT1) lncRNA regulates primary target genes using time-resolved MALAT1 knockdown followed by parallel RNA-seq and ATAC-seq assays. The results revealed that MALAT1 primarily regulates specific protein-coding genes and a substantial decrease in the accessibility downstream of the

Indexed as

Gene Expression Regulation, NeoplasticNuclear Receptor Subfamily 4, Group A, Member 1RNA, Long NoncodingBreast NeoplasmsCell Line, TumorFemaleHumansMCF-7 CellsPancreatic NeoplasmsRegulatory Sequences, Nucleic AcidMALAT1 long non-coding RNA, humanNR4A1 protein, humanNuclear Receptor Subfamily 4, Group A, Member 1RNA, Long Noncodingbreast cancerchromatin accessibilitychromatin-associated lncRNAsMALAT1NR4A1

Identifiers

PMID38791553
PMCPMC11121914

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.