Evidence map›Paper›PMID 38791306›Full record

ArticleInternational journal of molecular sciences2024

DDCM: A Computational Strategy for Drug Repositioning Based on Support-Vector Regression Algorithm.

Manyi Xu, Wan Li, Jiaheng He, Yahui Wang, Junjie Lv, Weiming He, Lina Chen, Hui Zhi

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Manyi XuCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.
Wan LiCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.ORCID 0000-0002-9797-0315
Jiaheng HeCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.
Yahui WangCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.
Junjie LvCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.
Weiming HeInstitute of Opto-Electronics, Harbin Institute of Technology, Harbin 150000, China.
Lina ChenCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.
Hui ZhiCollege of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150000, China.ORCID 0000-0001-9103-8642

Funding

National Natural Science Foundation of China 32170674Natural Science Foundation of Heilongjiang Province LH2020C05
6 · The paper itself

Abstract

Computational drug-repositioning technology is an effective tool for speeding up drug development. As biological data resources continue to grow, it becomes more important to find effective methods to identify potential therapeutic drugs for diseases. The effective use of valuable data has become a more rational and efficient approach to drug repositioning. The disease-drug correlation method (DDCM) proposed in this study is a novel approach that integrates data from multiple sources and different levels to predict potential treatments for diseases, utilizing support-vector regression (SVR). The DDCM approach resulted in potential therapeutic drugs for neoplasms and cardiovascular diseases by constructing a correlation hybrid matrix containing the respective similarities of drugs and diseases, implementing the SVR algorithm to predict the correlation scores, and undergoing a randomized perturbation and stepwise screening pipeline. Some potential therapeutic drugs were predicted by this approach. The potential therapeutic ability of these drugs has been well-validated in terms of the literature, function, drug target, and survival-essential genes. The method's feasibility was confirmed by comparing the predicted results with the classical method and conducting a co-drug analysis of the sub-branch. Our method challenges the conventional approach to studying disease-drug correlations and presents a fresh perspective for understanding the pathogenesis of diseases.

Indexed as

AlgorithmsDrug RepositioningCardiovascular DiseasesComputational BiologyHumansNeoplasmsSupport Vector Machinedrug repositioninghybrid matrixpotential therapeutic drugssupport-vector regression

Identifiers

PMID38791306
PMCPMC11121335

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.