Evidence map›Paper›PMID 38791244›Full record

ArticleInternational journal of molecular sciences2024

Peripheral Blood Gene Expression Profiling Reveals Molecular Pathways Associated with Cervical Artery Dissection.

Polina S Shlapakova, Larisa A Dobrynina, Ludmila A Kalashnikova, Mariia V Gubanova, Maria S Danilova, Elena V Gnedovskaya, Anastasia P Grigorenko, Fedor E Gusev, Andrey D Manakhov, Evgeny I Rogaev

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Polina S ShlapakovaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.ORCID 0009-0002-4181-7730
Larisa A DobryninaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.ORCID 0000-0001-9929-2725
Ludmila A KalashnikovaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.
Mariia V GubanovaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.ORCID 0000-0002-9893-712X
Maria S DanilovaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.
Elena V GnedovskayaThird Neurological Department, Research Center of Neurology, Moscow 125367, Russia.ORCID 0000-0001-6026-3388
Anastasia P GrigorenkoDepartment of Genomics and Human Genetics, Laboratory of Evolutionary Genomics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119333, Russia.
Fedor E GusevDepartment of Genomics and Human Genetics, Laboratory of Evolutionary Genomics, Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow 119333, Russia.ORCID 0000-0001-9859-4721
Andrey D ManakhovDepartment of Genetics, Center for Genetics and Life Science, Sirius University of Science and Technology, Sochi 354340, Russia.ORCID 0000-0002-5163-8747
Evgeny I RogaevDepartment of Genetics, Center for Genetics and Life Science, Sirius University of Science and Technology, Sochi 354340, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cervical artery dissection (CeAD) is the primary cause of ischemic stroke in young adults. Monogenic heritable connective tissue diseases account for fewer than 5% of cases of CeAD. The remaining sporadic cases have known risk factors. The clinical, radiological, and histological characteristics of systemic vasculopathy and undifferentiated connective tissue dysplasia are present in up to 70% of individuals with sporadic CeAD. Genome-wide association studies identified CeAD-associated genetic variants in the non-coding genomic regions that may impact the gene transcription and RNA processing. However, global gene expression profile analysis has not yet been carried out for CeAD patients. We conducted bulk RNA sequencing and differential gene expression analysis to investigate the expression profile of protein-coding genes in the peripheral blood of 19 CeAD patients and 18 healthy volunteers. This was followed by functional annotation, heatmap clustering, reports on gene-disease associations and protein-protein interactions, as well as gene set enrichment analysis. We found potential correlations between CeAD and the dysregulation of genes linked to nucleolar stress, senescence-associated secretory phenotype, mitochondrial malfunction, and epithelial-mesenchymal plasticity.

Indexed as

Gene Expression ProfilingAdultCase-Control StudiesFemaleGenome-Wide Association StudyHumansMaleMiddle AgedTranscriptomeVertebral Artery Dissectionbulk RNA sequencingcervical artery dissectionepithelial–mesenchymal plasticitygenome-wide association studiesmitochondrial malfunctionnucleolar stresssenescence-associated secretory phenotypeundifferentiated connective tissue dysplasia

Identifiers

PMID38791244
PMCPMC11121660

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.