Evidence map›Paper›PMID 38791231›Full record

ArticleInternational journal of molecular sciences2024

Loss of Conserved rRNA Modifications in the Peptidyl Transferase Center Leads to Diminished Protein Synthesis and Cell Growth in Budding Yeast.

Margus Leppik, Liisa Pomerants, Anett Põldes, Piret Mihkelson, Jaanus Remme, Tiina Tamm

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Functions and therapeutic applications of pseudouridylation.Nature reviews. Molecular cell biology · 2025
    Review
  4. Small nucleolar RNAs: the hidden precursors of cancer ribosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Margus LeppikInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.
Liisa PomerantsInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.
Anett PõldesInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.
Piret MihkelsonInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.
Jaanus RemmeInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.ORCID 0000-0002-4011-6580
Tiina TammInstitute of Molecular and Cell Biology, University of Tartu, 51010 Tartu, Estonia.ORCID 0000-0001-9943-2097

Funding

Estonian Research Council PRG1179Estonian Research Council PRG1741
6 · The paper itself

Abstract

Ribosomal RNAs (rRNAs) are extensively modified during the transcription and subsequent maturation. Three types of modifications, 2'-O-methylation of ribose moiety, pseudouridylation, and base modifications, are introduced either by a snoRNA-driven mechanism or by stand-alone enzymes. Modified nucleotides are clustered at the functionally important sites, including peptidyl transferase center (PTC). Therefore, it has been hypothesised that the modified nucleotides play an important role in ensuring the functionality of the ribosome. In this study, we demonstrate that seven 25S rRNA modifications, including four evolutionarily conserved modifications, in the proximity of PTC can be simultaneously depleted without loss of cell viability. Yeast mutants lacking three snoRNA genes (

Indexed as

Peptidyl TransferasesProtein BiosynthesisRNA, RibosomalSaccharomyces cerevisiaeMutationRibosomesRNA, FungalRNA Processing, Post-TranscriptionalRNA, Small NucleolarSaccharomyces cerevisiae ProteinsSaccharomycetalesPeptidyl TransferasesRNA, FungalRNA, RibosomalRNA, ribosomal, 25SRNA, Small NucleolarSaccharomyces cerevisiae Proteinsbudding yeastmethyltransferaseNop2pseudouridineribose 2′-O-methylationribosomerRNA modificationssnoRNASpb1translational fidelity

Identifiers

PMID38791231
PMCPMC11121408

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.