Evidence map›Paper›PMID 38790270›Full record

ArticleGenes2024

Establishing a Standardized DNA Extraction Method Using NaCl from Oral Mucosa Cells for Its Application in Imprinting Diseases Such as Prader-Willi and Angelman Syndromes: A Preliminary Investigation.

Letícia Lopes Cabral Guimarães da Fonseca, Danielle Nascimento Rocha, Hiago Azevedo Cintra, Luiza Loureiro de Araújo, Gabrielle Leal Monteiro Dos Santos, Leonardo Lima de Faria, Margarida Dos Santos Salú, Silvia Helena Dos Santos Leite, Adriana Duarte Rocha, Maria da Conceição Borges Lopes and 3 more

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Letícia Lopes Cabral Guimarães da FonsecaInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0001-7259-669X
Danielle Nascimento RochaInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0002-7578-8619
Hiago Azevedo CintraInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0002-4945-5968
Luiza Loureiro de AraújoInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0001-7020-6600
Gabrielle Leal Monteiro Dos SantosInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0009-0001-4802-4103
Leonardo Lima de FariaInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0002-2099-1476
Margarida Dos Santos SalúInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.
Silvia Helena Dos Santos LeiteInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0001-6609-954X
Adriana Duarte RochaInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0002-0678-581X
Maria da Conceição Borges LopesInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.
Igor Ribeiro FerreiraRural and Remote Support Services, Department of Health, Integrated Cardiovascular Clinical Network SA, Adelaide 5042, Australia.
Leonardo Henrique Ferreira GomesInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0002-1721-0608
Letícia Cunha GuidaInstituto Nacional da Saúde da Mulher, da Criança e do Adolescente Fernandes Figueira-Fundação Oswaldo Cruz, Rio de Janeiro 22250-020, Brazil.ORCID 0000-0003-3543-1532

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPQ) 470943/2014-9Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - Brazil (CAPES) 001Fundação de Amparo a Pesquisa do Estado do Rio de Janeiro/FAPERJ APQ1 2021Programa de Incentivo à Pesquisa PIP 4Programa Inova Fiocruz (Geração de Conhecimento) 2021Rede de Laboratórios de Referência- FIOCRUZ. 2018
6 · The paper itself

Abstract

backgroundDiagnosing imprinting defects in neonates and young children presents challenges, often necessitating molecular analysis for a conclusive diagnosis. The isolation of genetic material from oral swabs becomes crucial, especially in settings where blood sample collection is impractical or for vulnerable populations like newborns, who possess limited blood volumes and are often too fragile for invasive procedures. Oral swab samples emerge as an excellent source of DNA, effectively overcoming obstacles associated with rare diseases.

methodsIn our study, we specifically addressed the determination of the quality and quantity of DNA extracted from oral swab samples using NaCl procedures.

resultsWe compared these results with extractions performed using a commercial kit. Subsequently, the obtained material underwent MS-HRM analysis for loci associated with imprinting diseases such as Prader-Willi and Angelman syndromes.

conclusionsOur study emphasizes the significance of oral swab samples as a reliable source for obtaining DNA for MS-HRM analysis. NaCl extraction stands out as a practical and cost-effective method for genetic studies, contributing to a molecular diagnosis that proves particularly beneficial for patients facing delays in characterization, ultimately influencing their treatment.

Indexed as

Angelman SyndromeDNAGenomic ImprintingMouth MucosaPrader-Willi SyndromeHumansImprinting DisordersInfant, NewbornMaleSodium ChlorideDNASodium Chlorideimprinting disordermolecular diagnosticsoral swabPrader–Willi syndrome

Identifiers

PMID38790270
PMCPMC11120874

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.